ORF Finder
seq_orf_finderFind open reading frames (ORFs) on the forward strand (frames 0-2) of a nucleotide sequence. Set a minimum length to filter out short ORFs.
Instructions
Find open reading frames (forward strand, frames 0-2) in a nucleotide sequence.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| sequence | Yes | Nucleotide sequence (DNA or RNA; case-insensitive). IUPAC ambiguity codes (R, Y, S, W, K, M, B, D, H, V, N) are accepted where documented. | |
| min_length | No | Minimum ORF length in nucleotides (ORFs shorter than this are filtered out). |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| orfs | Yes | Open reading frames found (empty when none meet min_length). | |
| sequence | Yes | The input nucleotide sequence (uppercased; U is normalized to T). |