search_uniref
Search UniRef clusters (sequence-similarity groups at 100/90/50% identity) by query. Returns cluster ID, name, member counts, and representative member.
Instructions
Search UniRef clusters (sequence-similarity clusters of UniProt proteins).
UniRef100/90/50 group sequences at 100/90/50% identity. Returns cluster id,
name, member/organism counts, and the representative member. Use identity
to restrict to one clustering level.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| query | Yes | UniRef query, e.g. 'BRCA1', 'uniprotkb:P38398', or 'taxonomy_id:9606'. | |
| identity | No | Cluster identity threshold: '1.0'=UniRef100, '0.9'=UniRef90, '0.5'=UniRef50. | |
| size | No | Max clusters to return (1-500). | |
| format | No | 'summary' = compact list (default); 'tsv' = table. | summary |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| result | Yes |