Related Servers

No user-submitted related servers found.

Related Servers

• gromacs-mcp

  Alierkn

  A

  license

  B

  quality

  A

  maintenance

  Enables running GROMACS molecular dynamics simulations through natural language, with tools for topology building, solvation, simulation management, and trajectory processing via the Model Context Protocol.

  Updated 2 months ago (2026-07-08 08:52 UTC)

  31

  MIT

• vmd-mcp

  OmarArias-Gaguancela

  F

  license

  -Not graded

  quality

  D

  maintenance

  Enables control of VMD2 for molecular dynamics analysis through natural language, allowing users to load structures, set representations, measure distances, compute RMSD, and render images without Tcl scripting.

  Updated 4 months ago (2026-05-07 04:08 UTC)

  6

• vmd-hydrate-mcp

  wjgoarxiv

  A

  license

  A

  quality

  A

  maintenance

  Drive VMD from any LLM — render GROMACS/LAMMPS trajectories and analyze clathrate-hydrate cages through the Model Context Protocol.

  Updated 2 months ago (2026-07-03 05:34 UTC)

  17

  MIT

• MCP LAMMPS Server

  Chenghao-Wu

  A

  license

  -Not graded

  quality

  F

  maintenance

  A Model Context Protocol server that enables AI assistants to interact with LAMMPS for molecular dynamics simulations through natural language commands.

  Updated 8 months ago (2025-12-27 02:44 UTC)

  14

  Apache 2.0

• Protein Design MCP Server

  qfoldit

  A

  license

  -Not graded

  quality

  B

  maintenance

  Enables LLM agents to design proteins, predict structures, score interfaces, and run molecular dynamics simulations through a unified interface.

  Updated 6 days ago (2026-08-28 05:01 UTC)

  1

  Apache 2.0

• ParaView-MCP

  llnl

  A

  license

  -Not graded

  quality

  F

  maintenance

  Integrates multimodal large language models with ParaView to enable the creation and manipulation of scientific visualizations using natural language and visual inputs. It features visual feedback capabilities for iterative refinement, making advanced visualization workflows accessible through intelligent automation.

  Updated 4 months ago (2026-04-22 17:26 UTC)

  63

  BSD 3-Clause