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"author:wjgoarxiv" matching MCP servers:

  • vmd-hydrate-mcp

    wjgoarxiv
    A
    license
    A
    quality
    A
    maintenance
    Drive VMD from any LLM — render GROMACS/LAMMPS trajectories and analyze clathrate-hydrate cages through the Model Context Protocol.
    17
    MIT

  • pymol-mcp

    wjgoarxiv
    A
    license
    B
    quality
    B
    maintenance
    Headless PyMOL for molecular visualization, GROMACS/LAMMPS MD trajectories, and clathrate-hydrate cage analysis: H-bond networks, F3/F4 order parameters, and TRACE cage perception + occupancy.
    32
    MIT