Get Protein Domains
get_protein_domainsList Pfam protein domains annotated on a transcript's tolerance landscape, including domain ID, name, start/stop residues, meta-domain mapping status, and alignment depth.
Instructions
List the Pfam protein domains annotated on a transcript's tolerance landscape: each domain's ID, Name, start/stop residues, whether a meta-domain (homologous) mapping exists, and its alignment depth. Requires a built landscape (call request_tolerance_landscape first). Signature: get_protein_domains(transcript_id=, response_mode=).
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| response_mode | No | Verbosity: minimal|compact|standard|full (default compact). | compact |
| transcript_id | Yes | A versioned Ensembl transcript id (the .N version suffix is required), e.g. ENST00000269305.4. Resolve a gene symbol with resolve_transcript first. |