Medical Terminologies MCP

MeSH Tree Locations

mesh_tree

Read-onlyIdempotent

Retrieves MeSH tree numbers and hierarchy paths for a descriptor, showing where a term fits and its broader/narrower relationships.

Instructions

Get the tree hierarchy location(s) for a MeSH descriptor.

Use this tool to:

See where a term fits in the MeSH hierarchy
Understand broader/narrower relationships
Find related terms in the same branch

MeSH tree numbers show the hierarchical path (e.g., C14.280.647 for Myocardial Infarction).

Input Schema

Name	Required	Description	Default
`mesh_id`	Yes	MeSH Descriptor ID (e.g., D015242, D003920)

Output Schema

Name	Required	Description
`mesh_id`	Yes	The MeSH descriptor ID as submitted.
`provenance`	Yes	Provenance block: source, URL, data vintage, extraction instant, origin diagnostics, citation, license
`attribution`	Yes	Canonical source URLs of this response (attribution list)
`tree_numbers`	Yes	Tree numbers placing the descriptor in the MeSH hierarchy; a descriptor can sit in several branches.

Schema Changelog

Changes observed during successful MCP inspections.

Changed2 schema fields changedv2.4.0Oct 29, 2026

addedOutput schema / properties / mesh_id / description

Added value: +"The MeSH descriptor ID as submitted."

addedOutput schema / properties / tree_numbers / description

Added value: +"Tree numbers placing the descriptor in the MeSH hierarchy; a descriptor can sit in several branches."

Changed7 schema fields changedv2.3.0Oct 16, 2026

changedOutput schema / properties / provenance / description

Previous value: -"Provenance block (contract v1.1): source, URL, data vintage, extraction instant, origin diagnostics, citation, license"New value: +"Provenance block: source, URL, data vintage, extraction instant, origin diagnostics, citation, license"

addedOutput schema / properties / provenance / properties / derivation_note

Added value: +{
+  "description": "What this server computed; present together with derived",
+  "type": "string"
+}

addedOutput schema / properties / provenance / properties / derived

Added value: +{
+  "description": "Present (true) only when this server computed the value (e.g. a ranking or summary statistics) instead of passing on what the source returned",
+  "type": "boolean"
+}

changedOutput schema / properties / provenance / properties / field_sources / description

Previous value: -"Present only when the response joins parts from different origins or extraction instants (contract v1.2): for each group of fields, its URL, extraction instant and whether it came from cache. Absent in single-origin responses"New value: +"Present only when the response joins parts from different origins or extraction instants: for each group of fields, its URL, extraction instant and whether it came from cache. Absent in single-origin responses"

addedOutput schema / properties / provenance / properties / notices

Added value: +{
+  "description": "Caveats the source publishes about the data, verbatim (license statements are not repeated here; see the info://licenses resource). Absent when there is none",
+  "items": {
+    "type": "string"
+  },
+  "minItems": 1,
+  "type": "array"
+}

changedOutput schema / properties / provenance / properties / retrieval / description

Previous value: -"Origin diagnostics of THIS source in this call (contract v1.1): requests made to the upstream, attempts summed across retries, anomalies worked around (kind + count); unstable=true when any anomaly happened. null when nothing was measured (bundled dataset, or response served entirely from cache)"New value: +"Origin diagnostics of THIS source in this call: requests made to the upstream, attempts summed across retries, anomalies worked around (kind + count); unstable=true when any anomaly happened. null when nothing was measured (bundled dataset, or response served entirely from cache)"

addedOutput schema / properties / provenance / properties / revision

Added value: +{
+  "additionalProperties": false,
+  "description": "Whether the data can still change at the source: current = the version in force, the source may revise it; provisional = preliminary; final = will not change. Absent when unknown",
+  "properties": {
+    "note": {
+      "description": "O específico da fonte: o que revisa, quando, por quê",
+      "type": [
+        "string",
+        "null"
+      ]
+    },
+    "status": {
+      "description": "current = versão vigente, a fonte pode revisá-la; provisional = preliminar, incompleta ou sujeita a mudança (não compare como se fosse fechada); final = não muda mais, declarado pela fonte",
+      "enum": [
+        "current",
+        "provisional",
+        "final"
+      ],
+      "type": "string"
+    }
+  },
+  "required": [
+    "status",
+    "note"
+  ],
+  "type": "object"
+}

Changed1 schema field changedv2.1.1Oct 7, 2026

addedOutput schema / properties / provenance / properties / field_sources

Added value: +{
+  "description": "Present only when the response joins parts from different origins or extraction instants (contract v1.2): for each group of fields, its URL, extraction instant and whether it came from cache. Absent in single-origin responses",
+  "items": {
+    "additionalProperties": false,
+    "description": "Proveniência de um grupo de campos da resposta: de onde veio e quando foi extraído",
+    "properties": {
+      "data_vintage": {
+        "description": "Vintage/competência da sub-fonte",
+        "type": [
+          "string",
+          "null"
+        ]
+      },
+      "dataset_id": {
+        "description": "Identificador do conjunto da sub-fonte",
+        "type": [
+          "string",
+          "null"
+        ]
+      },
+      "fields": {
+        "description": "Campos do payload atribuídos a esta sub-fonte",
+        "items": {
+          "type": "string"
+        },
+        "minItems": 1,
+        "type": "array"
+      },
+      "retrieved_at": {
+        "description": "ISO-8601 da extração desta sub-fonte na origem",
+        "type": [
+          "string",
+          "null"
+        ]
+      },
+      "served_from_cache": {
+        "description": "true se esta sub-fonte veio do cache do servidor (retrieved_at é o da extração original); false se foi buscada nesta chamada; null se o servidor não distingue",
+        "type": [
+          "boolean",
+          "null"
+        ]
+      },
+      "source_url": {
+        "description": "URL canônica da sub-fonte que originou estes campos",
+        "type": "string"
+      }
+    },
+    "required": [
+      "fields",
+      "source_url",
+      "dataset_id",
+      "data_vintage",
+      "retrieved_at"
+    ],
+    "type": "object"
+  },
+  "minItems": 1,
+  "type": "array"
+}

Changed3 schema fields changedv1.15.0Sep 27, 2026

changedOutput schema / properties / provenance / description

Previous value: -"Provenance block (contract v1.0): source, URL, data vintage, extraction instant, citation, license"New value: +"Provenance block (contract v1.1): source, URL, data vintage, extraction instant, origin diagnostics, citation, license"

addedOutput schema / properties / provenance / properties / retrieval

Added value: +{
+  "anyOf": [
+    {
+      "additionalProperties": false,
+      "properties": {
+        "anomalies": {
+          "description": "Anomalias superadas até o sucesso, somadas por classe, em ordem fixa; [] se nenhuma",
+          "items": {
+            "additionalProperties": false,
+            "properties": {
+              "count": {
+                "description": "Ocorrências desta classe na chamada",
+                "maximum": 9007199254740991,
+                "minimum": 1,
+                "type": "integer"
+              },
+              "kind": {
+                "description": "Classe da anomalia (vocabulário fechado do contrato)",
+                "enum": [
+                  "timeout",
+                  "network",
+                  "http_4xx",
+                  "http_5xx",
+                  "rate_limited",
+                  "malformed_body"
+                ],
+                "type": "string"
+              }
+            },
+            "required": [
+              "kind",
+              "count"
+            ],
+            "type": "object"
+          },
+          "type": "array"
+        },
+        "attempts": {
+          "description": "Tentativas somadas, incluindo as repetidas (>= requests)",
+          "maximum": 9007199254740991,
+          "minimum": 1,
+          "type": "integer"
+        },
+        "requests": {
+          "description": "Idas distintas à origem que compõem esta resposta (fatias, páginas)",
+          "maximum": 9007199254740991,
+          "minimum": 1,
+          "type": "integer"
+        },
+        "unstable": {
+          "description": "true se houve repetição (attempts > requests) ou alguma anomalia",
+          "type": "boolean"
+        }
+      },
+      "required": [
+        "requests",
+        "attempts",
+        "anomalies",
+        "unstable"
+      ],
+      "type": "object"
+    },
+    {
+      "type": "null"
+    }
+  ],
+  "description": "Origin diagnostics of THIS source in this call (contract v1.1): requests made to the upstream, attempts summed across retries, anomalies worked around (kind + count); unstable=true when any anomaly happened. null when nothing was measured (bundled dataset, or response served entirely from cache)"
+}

changedOutput schema / properties / provenance / required

Previous value: -[
-  "source",
-  "source_url",
-  "data_vintage",
-  "retrieved_at",
-  "citation",
-  "license"
-]New value: +[
+  "source",
+  "source_url",
+  "data_vintage",
+  "retrieved_at",
+  "retrieval",
+  "citation",
+  "license"
+]

Changed1 schema field changedv1.11.0Sep 15, 2026
- addedInput schema / additionalProperties
```
Added value: +false
```
Changed4 schema fields changedv1.9.1Sep 1, 2026
- removedOutput schema / properties / provenance / properties / data_vintage / anyOf
```
Removed value: -[
-  {
-    "type": "string"
-  },
-  {
-    "type": "null"
-  }
-]
```
- addedOutput schema / properties / provenance / properties / data_vintage / type
```
Added value: +[
+  "string",
+  "null"
+]
```
- removedOutput schema / properties / provenance / properties / license / anyOf
```
Removed value: -[
-  {
-    "type": "string"
-  },
-  {
-    "type": "null"
-  }
-]
```
- addedOutput schema / properties / provenance / properties / license / type
```
Added value: +[
+  "string",
+  "null"
+]
```

Changed3 schema fields changedv1.8.0Aug 10, 2026

addedOutput schema / properties / attribution

Added value: +{
+  "description": "Canonical source URLs of this response (attribution list)",
+  "items": {
+    "type": "string"
+  },
+  "type": "array"
+}

addedOutput schema / properties / provenance

Added value: +{
+  "additionalProperties": false,
+  "description": "Provenance block (contract v1.0): source, URL, data vintage, extraction instant, citation, license",
+  "properties": {
+    "citation": {
+      "description": "Ready-to-use citation/attribution string",
+      "type": "string"
+    },
+    "data_vintage": {
+      "anyOf": [
+        {
+          "type": "string"
+        },
+        {
+          "type": "null"
+        }
+      ],
+      "description": "Version/release of the data as exposed by the source; null when not exposed"
+    },
+    "license": {
+      "anyOf": [
+        {
+          "type": "string"
+        },
+        {
+          "type": "null"
+        }
+      ],
+      "description": "License / legal regime of the data"
+    },
+    "retrieved_at": {
+      "description": "Real instant of the upstream extraction (ISO-8601, UTC). Responses served from cache keep the ORIGINAL fetch instant.",
+      "type": "string"
+    },
+    "source": {
+      "description": "Official upstream source of this data",
+      "type": "string"
+    },
+    "source_url": {
+      "description": "Canonical URL of the source (API base or dataset release)",
+      "type": "string"
+    }
+  },
+  "required": [
+    "source",
+    "source_url",
+    "data_vintage",
+    "retrieved_at",
+    "citation",
+    "license"
+  ],
+  "type": "object"
+}

changedOutput schema / required

Previous value: -[
-  "mesh_id",
-  "tree_numbers"
-]New value: +[
+  "mesh_id",
+  "tree_numbers",
+  "provenance",
+  "attribution"
+]

Changed1 schema field changedv1.5.7Jun 21, 2026
- removedInput schema / additionalProperties
```
Removed value: -false
```
First observedv1.2.1May 11, 2026

TDQS

A3.9/5.0

Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnlyHint, idempotentHint, destructiveHint=false and openWorldHint, so the safety profile is covered. The description adds real value beyond them by explaining what tree numbers represent and giving a concrete example format (C14.280.647), which tells the agent how to interpret the result.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Front-loaded with the core action, then a scannable bullet list of use cases and a clarifying example. Slightly more verbose than strictly necessary since the bullets partly restate the hierarchy idea, but every line is relevant.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a one-parameter read-only lookup with an output schema, the description covers purpose, use cases, and output interpretation. Nothing about return shape needs explaining because the output schema handles it; only sibling disambiguation is missing.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100% and the single mesh_id parameter is fully documented with pattern and examples in the schema. The description only restates that the input is a MeSH descriptor, adding no format or constraint detail beyond the structured field, so the baseline applies.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The first sentence states a specific verb and resource ('Get the tree hierarchy location(s) for a MeSH descriptor'), which is unambiguous. It does not explicitly distinguish itself from the close sibling mesh_descriptor, so the agent must infer the boundary rather than being told.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines4/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The bullet list gives clear positive triggers (see hierarchy placement, understand broader/narrower relationships, find related terms in a branch). It stops short of stating when not to use it or naming mesh_descriptor/mesh_search as alternatives for those cases, which is why this is not a 5.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.