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metamind-vault-rag

by Nikitzu

metamind-vault-rag

A retrieval engine for a directory of markdown. It watches files, indexes them incrementally, and answers hybrid search queries over them.

Vectors live in sqlite-vec, keywords in SQLite FTS5, and the two are fused with reciprocal rank fusion. Embeddings run in-process through fastembed's ONNX models, so there is no server to stand up and no API key to hold. An optional cross-encoder rescore tier is available through the rerank extra.

Install

uv tool install metamind-vault-rag

Related MCP server: mnemonic

Entry points

Command

Purpose

metamind-vault-rag-watcher

Watch a directory and index changes

metamind-vault-rag-indexer

One-shot full reindex

metamind-vault-rag-http

Loopback HTTP search API

metamind-vault-rag-server

stdio MCP server

metamind-vault-rag-doctor

Environment and index diagnostics

Configuration

Variable

Meaning

VAULT_PATH

Directory to index

VAULT_COLLECTION

Collection name, which scopes the index files

VAULT_HTTP_PORT

Port for the loopback search API

VAULT_STATE_DIR

Where indexes, caches and logs are written. Defaults to ~/.vault-rag

Indexes are written to the state directory, named after the collection, and are never placed inside the corpus. Two clients pointed at different collections, or different state directories, coexist on one machine without either knowing about the other.

Consumers

Installed by any client that wants retrieval without running a service. The engine holds no opinion about who is asking: it names no client in its output, its environment variables are all VAULT_-prefixed, and it writes nothing outside the state directory.

Development

uv run --extra dev pytest

A client can be pointed at a working copy instead of a release with uv tool install --from /path/to/this/repo metamind-vault-rag.

Licence

MIT

Available Tools

3 tools
search_vaultC

Semantic search over the Obsidian Knowledge vault.

ParametersJSON Schema
NameRequiredDescriptionDefault
kNo
queryYes

Output Schema

ParametersJSON Schema
NameRequiredDescription
resultYes

TDQS

C2.1/5.0
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations are absent, so the description should fully disclose behavioral aspects. It merely states 'semantic search' – which implies a read operation but does not explicitly state side effects, resource constraints, or result handling. No details on output stability, rate limits, or side effects are given. Minimal transparency.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness2/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is a single sentence, which is concise. However, it is under-specified: it lacks necessary detail for an agent to use the tool effectively. The brevity is not a virtue because it omits critical information, making it more of an under-specification than a well-structured concise entry.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

The tool has two parameters and an output schema, but the description gives no information about return format, pagination, or semantics. Since annotations are missing, the description must bear the burden of explaining expected behavior. It fails to provide enough context to use the tool safely, especially for a semantic search that could have variable behavior.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters1/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 0%, so the description is the only source of parameter meaning. The description does not mention 'query' or 'k' at all. The schema lists 'k' with a default but no description, and 'query' without context. This is a complete failure to provide any parameter semantics in the description.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose3/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description states it performs 'semantic search' over the vault, which clearly identifies the action and resource. However, it does not differentiate from sibling tools like 'related_notes' or 'expand_search' – the term 'semantic' hints at a method but not why this one is distinct. Purpose is clear but not enriched with scope or contrast.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance is provided on when to use this tool versus the siblings. The description only states what it does, not when it is the right choice. There is no mention of use cases, exclusions, or alternative recommendations.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

Tool Schema Changelog

Recent tool additions, removals, and schema changes observed during successful MCP inspections.

  1. 3 tool updatesv0.10.1
    • First observedexpand_search
    • First observedrelated_notes
    • First observedsearch_vault

TDQS

C2.7/5.0

Scored across 3 tools

Disambiguation5/5

Each tool has a clearly distinct purpose: semantic search, finding related notes, and expanding search via wikilinks. There is no overlap or ambiguity.

Naming Consistency4/5

All tools use snake_case and follow a verb-like pattern, but 'related_notes' uses an adjective rather than a verb, creating minor inconsistency with the verb_noun style of the other two.

Tool Count5/5

With only 3 tools, the set is minimal but well-scoped for the server's focus on vault search and navigation. It avoids superfluous tools while covering essential actions.

Completeness5/5

The server covers the core needs of a RAG vault assistant: searching semantically, exploring relationships, and expanding through linked notes. This is a complete set for its intended purpose.

Maintenance

ActivityMaintained
ResponsivenessNo issues

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