nf-core MCP Server

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search-pipelines

Search and retrieve bioinformatics pipeline configurations from nf-core repositories using a query-based system to streamline workflow exploration and management.

Input Schema

Name	Required	Description	Default
`pipeline`	No
`query`	Yes

Input Schema (JSON Schema)

{
  "$schema": "http://json-schema.org/draft-07/schema#",
  "additionalProperties": false,
  "properties": {
    "pipeline": {
      "type": "string"
    },
    "query": {
      "type": "string"
    }
  },
  "required": [
    "query"
  ],
  "type": "object"
}

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