Semantic Search MCP Server

/Users/mix0z/Library/Python/3.9/lib/python/site-packages/urllib3/__init__.py:35: NotOpenSSLWarning: urllib3 v2 only supports OpenSSL 1.1.1+, currently the 'ssl' module is compiled with 'LibreSSL 2.8.3'. See: https://github.com/urllib3/urllib3/issues/3020 warnings.warn( /Users/mix0z/Library/Python/3.9/lib/python/site-packages/google/api_core/_python_version_support.py:252: FutureWarning: You are using a Python version (3.9.6) past its end of life. Google will update google.api_core with critical bug fixes on a best-effort basis, but not with any other fixes or features. Please upgrade to the latest Python version, or at least Python 3.10, and then update google.api_core. warnings.warn(message, FutureWarning) An error occurred: module 'importlib.metadata' has no attribute 'packages_distributions' Output directory: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355 Loaded 14 questions ================================================================================ Question: django_model_save Repo: django Query: Where is the save() method defined on Django Model class?... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'JavaScript': 43, 'Python': 2034} [SGR] Primary (detected): Python [SGR] Framework (detected): None [SGR] Top dirs: ['django', 'docs', 'extras', 'js_tests', 'scripts', 'tests'] [SGR] Manifests: ['pyproject.toml', 'package.json', 'docs/requirements.txt', 'tests/admin_scripts/custom_templates/project_template/additional_dir/requirements.txt'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1679ms [SGR] [Smart] Key dirs by source count: ['tests/', 'django/', 'js_tests/', 'docs/', 'scripts/']... [SGR] Final Language: Python [SGR] Final Languages: {'JavaScript': 43, 'Python': 2034} [SGR] Final Framework: Django [SGR] Final Type: web_framework [SGR] Final Key dirs: ['tests/', 'django/', 'js_tests/', 'docs/', 'scripts/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 743ms [SGR] Concepts: ['Django Model class', 'save() method'] [SGR] User problem: The user wants to find the definition of the save() method within the Django Model class. [SGR] What to find: The definition of the save() method on the Django Model class [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: tests/ [SGR] [Tool] list_dir: django/ [SGR] [Tool] list_dir: js_tests/ [SGR] [Tool] list_dir: docs/ [SGR] Explored 4 key directories [SGR] Gemini call took 1711ms [SGR] Primary terms: ['Model', 'save'] [SGR] Secondary terms: ['db/models'] [SGR] Likely files: ['django/db/models/__init__.py', 'django/db/models/base.py'] [SGR] Step 2.5: Reading 2 likely files... [SGR] [Tool] read_file: django/db/models/__init__.py [SGR] [Read] django/db/models/__init__.py: 0 definitions found [SGR] [Tool] read_file: django/db/models/base.py [SGR] [Read] django/db/models/base.py: 7 definitions found [SGR] Extracted 7 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1517ms [SGR] TypedSearchPlan: 2 grep, 1 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: class Model - Find the definition of the Model class. [SGR] 2. grep: def save - Find the save() method definition within the Model [SGR] 3. read_file: django/db/models/base.py - Read the file containing the Model class definitio [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 class Model /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/django/repo/django/db/models [SGR] [Tool] read_file: django/db/models/base.py [SGR] [Tool] (cache hit) [SGR] [Tool] grep: rg --json -C 3 -m 50 def save /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/django/repo/django/db/models/base.py [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1055ms [SGR] Found relevant: True [SGR] Key findings: ['django/db/models/base.py:498: class Model(AltersData, metaclass=ModelBase):'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 687ms [SGR] Found relevant: True [SGR] Key findings: ['django/db/models/base.py:830: def save()', 'django/db/models/base.py:939: def save_base()'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1023ms [SGR] Found relevant: True [SGR] Key findings: ['django/db/models/base.py:830: def save()', 'django/db/models/base.py:939: def save_base()'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 941ms [SGR] Summary: The `save()` method on a Django Model class is defined in `django/db/models/base.py`. There is also ... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: django/db/models/base.py [SGR] [Tool] read_file: django/db/models/base.py [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 9646ms [SGR] LLM time: 9612ms [SGR] Tool time: 34ms [SGR] Tools used: {'grep': 2, 'read_file': 1} [SGR] Confidence progression: medium → high → high [SGR] High confidence reached at iteration: 2 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_model_save_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_model_save_steps.md --- RESULTS --- Expected: ['django/db/models/base.py'] Found: ['django/db/models/base.py'] Matched: ['django/db/models/base.py'] Recall: 100% ================================================================================ Question: django_login_required Repo: django Query: I want to protect a view so only logged-in users can access it. How does the login_required decorato... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'JavaScript': 43, 'Python': 2034} [SGR] Primary (detected): Python [SGR] Framework (detected): None [SGR] Top dirs: ['django', 'docs', 'extras', 'js_tests', 'scripts', 'tests'] [SGR] Manifests: ['pyproject.toml', 'package.json', 'docs/requirements.txt', 'tests/admin_scripts/custom_templates/project_template/additional_dir/requirements.txt'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 914ms [SGR] [Smart] Key dirs by source count: ['tests/', 'django/', 'js_tests/', 'django', 'tests']... [SGR] Final Language: Python [SGR] Final Languages: {'JavaScript': 43, 'Python': 2034} [SGR] Final Framework: Django [SGR] Final Type: web_framework [SGR] Final Key dirs: ['tests/', 'django/', 'js_tests/', 'django', 'tests', 'docs', 'scripts', 'js_tests'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 702ms [SGR] Concepts: ['authentication', 'authorization', 'decorators'] [SGR] User problem: The user wants to restrict access to a view to only authenticated users. [SGR] What to find: The implementation details of the `login_required` decorator to understand how it verifies user authentication status. [SGR] Question type: how_it_works [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: tests/ [SGR] [Tool] list_dir: django/ [SGR] [Tool] list_dir: js_tests/ [SGR] [Tool] list_dir: django [SGR] Explored 4 key directories [SGR] Gemini call took 1589ms [SGR] Primary terms: ['auth', 'login_required', 'decorators'] [SGR] Secondary terms: ['views', 'middleware'] [SGR] Likely files: ['django/contrib/auth/decorators.py', 'django/contrib/auth/views.py'] [SGR] Step 2.5: Reading 2 likely files... [SGR] [Tool] read_file: django/contrib/auth/decorators.py [SGR] [Read] django/contrib/auth/decorators.py: 6 definitions found [SGR] [Tool] read_file: django/contrib/auth/views.py [SGR] [Read] django/contrib/auth/views.py: 18 definitions found [SGR] Extracted 24 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1577ms [SGR] TypedSearchPlan: 1 grep, 1 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 2 (from TypedSearchPlan) [SGR] 1. grep: login_required - Find the implementation of the login_required deco [SGR] 2. read_file: django/contrib/auth/decorators.py - Read the source code of the login_required decorat [SGR] Executing 2 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 login_required /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/django/repo/django/contrib/auth [SGR] [Tool] read_file: django/contrib/auth/decorators.py [SGR] [Tool] (cache hit) [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1631ms [SGR] Found relevant: True [SGR] Key findings: ['django/contrib/auth/decorators.py:71: def login_required(', 'django/contrib/auth/decorators.py:92: view_func.login_required = False', 'django/contrib/auth/views.py:10: from django.contrib.auth.decorators import login_not_required, login_required', 'django/contrib/auth/views.py:355: [sensitive_post_parameters(), csrf_protect, login_required]', 'django/contrib/auth/views.py:376: @method_decorator(login_required, name="dispatch")', 'django/contrib/auth/middleware.py:53: if not getattr(view_func, "login_required", True):', 'django/contrib/auth/middleware.py:67: "login_required\' decorator."'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 2434ms [SGR] Found relevant: True [SGR] Key findings: ['django/contrib/auth/decorators.py:12: def user_passes_test(test_func, login_url=None, redirect_field_name=REDIRECT_FIELD_NAME)', 'django/contrib/auth/decorators.py:15: """Decorator for views that checks that the user passes the given test, redirecting to the log-in page if necessary. The test should be a callable that takes the user object and returns True if the user passes."""', 'django/contrib/auth/decorators.py:33: from django.contrib.auth.views import redirect_to_login', 'django/contrib/auth/decorators.py:37: if iscoroutinefunction(view_func):', 'django/contrib/auth/decorators.py:41: if iscoroutinefunction(test_func):'] [SGR] Confidence: high [SGR] Need more: True [SGR] Gemini call took 875ms [SGR] Gemini call took 1125ms [SGR] Gemini call took 1773ms [SGR] [Aggregation] 3 valid actions, 0 stop, 0 invalid [SGR] Iteration 3: read_file [SGR] [Tool] read_file: django/contrib/auth/decorators.py [SGR] [Tool] (cache hit) [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1797ms [SGR] Found relevant: True [SGR] Key findings: ['django/contrib/auth/decorators.py:12: def user_passes_test(test_func, login_url=None, redirect_field_name=REDIRECT_FIELD_NAME)', 'django/contrib/auth/decorators.py:15: """Decorator for views that checks that the user passes the given test, redirecting to the log-in page if necessary. The test should be a callable that takes the user object and returns True if the user passes."""', 'django/contrib/auth/decorators.py:33: from django.contrib.auth.views import redirect_to_login', 'django/contrib/auth/decorators.py:37: if iscoroutinefunction(view_func):', 'django/contrib/auth/decorators.py:41: if iscoroutinefunction(test_func):'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - stopping search [SGR] Step 5: Generating final answer... [SGR] Gemini call took 2410ms [SGR] Summary: The `login_required` decorator in Django, found in `django/contrib/auth/decorators.py`, protects vie... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: django/contrib/auth/decorators.py [SGR] [Tool] read_file: django/contrib/auth/decorators.py [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 15146ms [SGR] LLM time: 15116ms [SGR] Tool time: 30ms [SGR] Tools used: {'grep': 1, 'read_file': 2} [SGR] Confidence progression: high → high → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_login_required_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_login_required_steps.md --- RESULTS --- Expected: ['django/contrib/auth/decorators.py'] Found: ['django/contrib/auth/decorators.py'] Matched: ['django/contrib/auth/decorators.py'] Recall: 100% ================================================================================ Question: django_404_view Repo: django Query: Where is the page_not_found view function defined that renders 404.html template?... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'JavaScript': 43, 'Python': 2034} [SGR] Primary (detected): Python [SGR] Framework (detected): None [SGR] Top dirs: ['django', 'docs', 'extras', 'js_tests', 'scripts', 'tests'] [SGR] Manifests: ['pyproject.toml', 'package.json', 'docs/requirements.txt', 'tests/admin_scripts/custom_templates/project_template/additional_dir/requirements.txt'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 870ms [SGR] [Smart] Key dirs by source count: ['tests/', 'django/', 'js_tests/']... [SGR] Final Language: Python [SGR] Final Languages: {'JavaScript': 43, 'Python': 2034} [SGR] Final Framework: Django [SGR] Final Type: web_framework [SGR] Final Key dirs: ['tests/', 'django/', 'js_tests/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 832ms [SGR] Concepts: ['404 error handling', 'page not found view'] [SGR] User problem: The user needs to find the location of the page_not_found view function. [SGR] What to find: The definition of the page_not_found view function that renders the 404.html template. [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: tests/ [SGR] [Tool] list_dir: django/ [SGR] [Tool] list_dir: js_tests/ [SGR] Explored 3 key directories [SGR] Gemini call took 1826ms [SGR] Primary terms: ['page_not_found', 'handler', 'http', 'views'] [SGR] Secondary terms: ['404', 'template'] [SGR] Likely files: ['django/core/handlers/', 'django/views/'] [SGR] Step 2.5: Reading 2 likely files... [SGR] [Tool] read_file: django/core/handlers/__init__.py [SGR] [Tool] read_file: django/core/handlers/asgi.py [SGR] [Read] django/core/handlers/asgi.py: 12 definitions found [SGR] [Tool] read_file: django/core/handlers/base.py [SGR] [Read] django/core/handlers/base.py: 5 definitions found [SGR] [Tool] read_file: django/views/__init__.py [SGR] [Read] django/views/__init__.py: 0 definitions found [SGR] [Tool] read_file: django/views/csrf.py [SGR] [Read] django/views/csrf.py: 2 definitions found [SGR] [Tool] read_file: django/views/debug.py [SGR] [Read] django/views/debug.py: 17 definitions found [SGR] Extracted 36 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1779ms [SGR] TypedSearchPlan: 2 grep, 1 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: def page_not_found - Find the definition of the page_not_found function [SGR] 2. grep: page_not_found - Search for 'page_not_found' in view files to ensur [SGR] 3. read_file: django/core/handlers/exception.py - Read the file where page_not_found is likely defin [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob *.py -m 50 page_not_found /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/django/repo/django/views [SGR] [Tool] grep: rg --json -C 3 -m 50 def page_not_found /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/django/repo/django/core/handlers [SGR] [Tool] read_file: django/core/handlers/exception.py [SGR] Step 3: Interpreting result... [SGR] Gemini call took 610ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 846ms [SGR] Found relevant: True [SGR] Key findings: ['django/views/defaults.py:35: def page_not_found(request, exception, template_name=ERROR_404_TEMPLATE_NAME):'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 749ms [SGR] Found relevant: True [SGR] Key findings: ['django/views/defaults.py:35: def page_not_found(request, exception, template_name=ERROR_404_TEMPLATE_NAME):'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1479ms [SGR] Summary: The `page_not_found` view function is defined in `django/views/defaults.py`. It is responsible for r... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: django/views/defaults.py [SGR] [Tool] read_file: django/views/defaults.py [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 9320ms [SGR] LLM time: 9289ms [SGR] Tool time: 31ms [SGR] Tools used: {'grep': 2, 'read_file': 1} [SGR] Confidence progression: low → high → high [SGR] High confidence reached at iteration: 2 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_404_view_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/django_404_view_steps.md --- RESULTS --- Expected: ['django/views/defaults.py'] Found: ['django/views/defaults.py'] Matched: ['django/views/defaults.py'] Recall: 100% ================================================================================ Question: gin_basic_routing Repo: gin Query: Find routergroup.go where RouterGroup.GET method registers routes... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Go': 96} [SGR] Primary (detected): Go [SGR] Framework (detected): None [SGR] Top dirs: ['binding', 'codec', 'docs', 'examples', 'ginS', 'internal', 'render', 'testdata'] [SGR] Manifests: ['go.mod', 'go.sum'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1374ms [SGR] [Smart] Priority dir: internal/ (4 source files) [SGR] [Smart] Key dirs by source count: ['internal/', 'binding/', 'render/', 'codec/', 'ginS/']... [SGR] Final Language: Go [SGR] Final Languages: {'Go': 96} [SGR] Final Framework: Gin [SGR] Final Type: web_framework [SGR] Final Key dirs: ['internal/', 'binding/', 'render/', 'codec/', 'ginS/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 967ms [SGR] Concepts: ['route registration', 'RouterGroup.GET method'] [SGR] User problem: The user wants to find the specific file and method where the GET method of RouterGroup registers routes. [SGR] What to find: The code within routergroup.go that implements the RouterGroup.GET method to register routes. [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: internal/ [SGR] [Tool] list_dir: binding/ [SGR] [Tool] list_dir: render/ [SGR] [Tool] list_dir: codec/ [SGR] Explored 4 key directories [SGR] Gemini call took 1089ms [SGR] Primary terms: ['RouterGroup', 'GET', 'routergroup', 'route registration'] [SGR] Secondary terms: ['gin', 'path'] [SGR] Likely files: ['gin.go'] [SGR] Step 2.5: Reading 1 likely files... [SGR] [Tool] read_file: gin.go [SGR] [Read] gin.go: 3 definitions found [SGR] Extracted 3 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1859ms [SGR] TypedSearchPlan: 1 grep, 1 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: RouterGroup.GET - Find the definition of RouterGroup.GET method to u [SGR] 2. read_file: gin/routergroup.go - Read the routergroup.go file to understand how Rou [SGR] 3. glob_search: routergroup.go - Find the routergroup.go file to examine RouterGrou [SGR] [Path fix] gin/routergroup.go → routergroup.go [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 RouterGroup.GET /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo/gin [SGR] [Tool] read_file: routergroup.go [SGR] [Tool] glob_search: routergroup.go in gin/ [SGR] Step 3: Interpreting result... [SGR] Gemini call took 515ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 941ms [SGR] Found relevant: True [SGR] Key findings: ['routergroup.go:38: GET(string, ...HandlerFunc) IRoutes'] [SGR] Confidence: high [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 753ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Gemini call took 760ms [SGR] Gemini call took 823ms [SGR] Gemini call took 810ms [SGR] [Aggregation] 3 valid actions, 0 stop, 0 invalid [SGR] Iteration 4: read_file [SGR] [Tool] read_file: routergroup.go [SGR] [Tool] (cache hit) [SGR] Step 3: Interpreting result... [SGR] Gemini call took 625ms [SGR] Found relevant: True [SGR] Key findings: ['routergroup.go:38: GET(string, ...HandlerFunc) IRoutes'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - stopping search [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1332ms [SGR] Summary: The `GET` method in `RouterGroup` is defined in `routergroup.go` and is responsible for registering ... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: routergroup.go [SGR] [Tool] read_file: routergroup.go [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 4 [SGR] Total time: 10322ms [SGR] LLM time: 10304ms [SGR] Tool time: 18ms [SGR] Tools used: {'grep': 1, 'read_file': 2, 'glob_search': 1} [SGR] Confidence progression: low → high → low → high [SGR] High confidence reached at iteration: 2 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_basic_routing_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_basic_routing_steps.md --- RESULTS --- Expected: ['routergroup.go'] Found: ['routergroup.go'] Matched: ['routergroup.go'] Recall: 100% ================================================================================ Question: gin_json_render Repo: gin Query: Where is the JSON render type defined that serializes data to JSON?... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Go': 96} [SGR] Primary (detected): Go [SGR] Framework (detected): None [SGR] Top dirs: ['binding', 'codec', 'docs', 'examples', 'ginS', 'internal', 'render', 'testdata'] [SGR] Manifests: ['go.mod', 'go.sum'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1096ms [SGR] [Smart] Priority dir: internal/ (4 source files) [SGR] [Smart] Key dirs by source count: ['internal/', 'binding/', 'render/', 'codec/']... [SGR] Final Language: Go [SGR] Final Languages: {'Go': 96} [SGR] Final Framework: Gin [SGR] Final Type: web_framework [SGR] Final Key dirs: ['internal/', 'binding/', 'render/', 'codec/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 959ms [SGR] Concepts: ['JSON serialization', 'data serialization', 'render type'] [SGR] User problem: The user wants to find the definition of the JSON render type used for serializing data to JSON. [SGR] What to find: the definition of the JSON render type [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: internal/ [SGR] [Tool] list_dir: binding/ [SGR] [Tool] list_dir: render/ [SGR] [Tool] list_dir: codec/ [SGR] Explored 4 key directories [SGR] Gemini call took 2818ms [SGR] Primary terms: ['json', 'json', 'json', 'render', 'data'] [SGR] Secondary terms: ['serialization', 'binding'] [SGR] Likely files: ['render/json.go', 'binding/json.go', 'codec/json/json.go'] [SGR] Step 2.5: Reading 3 likely files... [SGR] [Tool] read_file: render/json.go [SGR] [Read] render/json.go: 19 definitions found [SGR] [Tool] read_file: binding/json.go [SGR] [Read] binding/json.go: 5 definitions found [SGR] [Tool] read_file: codec/json/json.go [SGR] [Read] codec/json/json.go: 7 definitions found [SGR] Extracted 31 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 2201ms [SGR] TypedSearchPlan: 3 grep, 2 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 5 (from TypedSearchPlan) [SGR] 1. grep: json - Search for 'json' in the render directory to find [SGR] 2. grep: json - Search for 'json' in the binding directory to find [SGR] 3. grep: render - Search for the 'render' keyword within Go files in [SGR] 4. read_file: render/json.go - Read the render/json.go file to understand its JSO [SGR] 5. read_file: binding/json.go - Read the binding/json.go file to understand its JS [SGR] Executing 5 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo/render [SGR] [Tool] grep: rg --json -C 3 -m 50 json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo/binding [SGR] [Tool] grep: rg --json -C 3 --glob *.go -m 50 render /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo/render [SGR] [Tool] read_file: render/json.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: binding/json.go [SGR] [Tool] (cache hit) [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1008ms [SGR] Found relevant: True [SGR] Key findings: ['render/json.go:14: "github.com/gin-gonic/gin/codec/json"', 'render/json.go:51: jsonContentType = []string{"application/json; charset=utf-8"}', 'render/json.go:52: jsonpContentType'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 2722ms [SGR] Found relevant: True [SGR] Key findings: ['binding/binding.go:13: MIMEJSON = "application/json"', 'binding/binding.go:76: JSON BindingBody = jsonBinding{}', 'binding/json.go:27: type jsonBinding struct{}', 'binding/json.go:29: func (jsonBinding) Name() string {', 'binding/json.go:30: return "json"', 'binding/json.go:33: func (jsonBinding) Bind(req *http.Request, obj any) error {', 'binding/json.go:40: func (jsonBinding) BindBody(body []byte, obj any) error {', 'binding/json.go:45: decoder := json.API.NewDecoder(r)', 'binding/binding_test.go:186: JSON, "json",', 'binding/binding_test.go:197: testBodyBindingSlice(t, JSON, "json", "/", "/", `[]`, ``)'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 663ms [SGR] Found relevant: True [SGR] Key findings: ['render/json.go:5: package render', 'render/protobuf.go:5: package render', 'render/render.go:5: package render'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1095ms [SGR] Found relevant: True [SGR] Key findings: ['render/json.go:19: type JSON struct', 'render/json.go:23: type IndentedJSON struct', 'render/json.go:29: type SecureJSON struct', 'render/json.go:35: type JsonpJSON struct', 'render/json.go:41: type AsciiJSON struct', 'render/json.go:46: type PureJSON struct'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 2523ms [SGR] Summary: The JSON render type is defined in the `render/json.go` file. This file contains several types for r... [SGR] Code locations: 3 [SGR] Confidence: high [SGR] [Tool] read_file: render/json.go [SGR] [Tool] read_file: render/json.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: codec/json/json.go [SGR] [Tool] read_file: codec/json/json.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: binding/json.go [SGR] [Tool] read_file: binding/json.go [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 3 [SGR] Total iterations: 4 [SGR] Total time: 15121ms [SGR] LLM time: 15106ms [SGR] Tool time: 15ms [SGR] Tools used: {'grep': 3, 'read_file': 1} [SGR] Confidence progression: high → high → medium → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_json_render_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_json_render_steps.md --- RESULTS --- Expected: ['render/json.go'] Found: ['render/json.go', 'codec/json/json.go', 'binding/json.go'] Matched: ['render/json.go'] Recall: 100% ================================================================================ Question: gin_abort Repo: gin Query: When I call c.Abort() in middleware, how does it stop the request from reaching my handler?... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Go': 96} [SGR] Primary (detected): Go [SGR] Framework (detected): None [SGR] Top dirs: ['binding', 'codec', 'docs', 'examples', 'ginS', 'internal', 'render', 'testdata'] [SGR] Manifests: ['go.mod', 'go.sum'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1276ms [SGR] [Smart] Priority dir: internal/ (4 source files) [SGR] [Smart] Key dirs by source count: ['internal/', 'binding/', 'render/', 'codec/', 'ginS/']... [SGR] Final Language: Go [SGR] Final Languages: {'Go': 96} [SGR] Final Framework: Gin [SGR] Final Type: web_framework [SGR] Final Key dirs: ['internal/', 'binding/', 'render/', 'codec/', 'ginS/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 1198ms [SGR] Concepts: ['middleware execution', 'request abortion', 'handler invocation'] [SGR] User problem: The user wants to understand why calling `c.Abort()` in a middleware prevents the request from reaching the intended handler. [SGR] What to find: the mechanism by which `c.Abort()` stops the request flow to the handler [SGR] Question type: why_behavior [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: internal/ [SGR] [Tool] list_dir: binding/ [SGR] [Tool] list_dir: render/ [SGR] [Tool] list_dir: codec/ [SGR] Explored 4 key directories [SGR] Gemini call took 2487ms [SGR] Primary terms: ['context', 'middleware', 'abort'] [SGR] Secondary terms: ['gin.go', 'context.go'] [SGR] Likely files: ['context.go', 'gin.go', 'middleware_test.go'] [SGR] Step 2.5: Reading 3 likely files... [SGR] [Tool] read_file: context.go [SGR] [Read] context.go: 9 definitions found [SGR] [Tool] read_file: gin.go [SGR] [Read] gin.go: 3 definitions found [SGR] [Tool] read_file: middleware_test.go [SGR] [Read] middleware_test.go: 6 definitions found [SGR] Extracted 18 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 2426ms [SGR] TypedSearchPlan: 3 grep, 2 read, 0 list, 0 glob [SGR] Strategy: trace_flow [SGR] Actions: 5 (from TypedSearchPlan) [SGR] 1. grep: c.Abort() - Find all occurrences of c.Abort() to understand it [SGR] 2. grep: middleware - Find where middleware is defined and how it intera [SGR] 3. grep: context.*abort - Search within context.go for functions related to [SGR] 4. read_file: gin.go - Understand the overall request handling flow in Gi [SGR] 5. read_file: context.go - Examine the implementation of context abortion to [SGR] Executing 5 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob *.go -m 50 c.Abort() /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo [SGR] [Tool] grep: rg --json -C 3 --glob *.go -m 50 middleware /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo [SGR] [Tool] grep: rg --json -C 3 --glob context.go -m 50 context.*abort /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/gin/repo [SGR] [Tool] read_file: gin.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: context.go [SGR] [Tool] (cache hit) [SGR] Step 3: Interpreting result... [SGR] Gemini call took 2608ms [SGR] Found relevant: True [SGR] Key findings: ['context.go:223: c.Abort()', 'context.go:230: c.Abort()', 'context.go:238: c.Abort()', 'context.go:798: c.AbortWithError(http.StatusBadRequest, err).SetType(ErrorTypeBind)', 'context.go:817: c.AbortWithError(http.StatusRequestEntityTooLarge, err).SetType(ErrorTypeBind)', 'context.go:819: c.AbortWithError(http.StatusBadRequest, err).SetType(ErrorTypeBind)', 'context.go:1146: c.Abort()', 'context.go:1361: c.AbortWithError(http.StatusNotAcceptable, errors.New("the accepted formats are not offered by the server"))', 'recovery.go:89: c.Abort()', 'recovery.go:115: c.AbortWithStatus(http.StatusInternalServerError)'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1394ms [SGR] Found relevant: True [SGR] Key findings: ['gin.go:50: // HandlerFunc defines the handler used by gin middleware as return value.', "gin.go:90: // Engine is the framework's instance, it contains the muxer, middleware and configuration settings.", 'gin.go:340: func (engine *Engine) Use(middleware ...HandlerFunc) IRoutes {', 'gin.go:341: engine.RouterGroup.Use(middleware...)', 'routergroup.go:65: func (group *RouterGroup) Use(middleware ...HandlerFunc) IRoutes {', 'routergroup.go:66: group.Handlers = append(group.Handlers, middleware...)', 'routergroup.go:93: // Handle registers a new request handle and middleware with the given path and method.', 'routergroup.go:94: // The last handler should be the real handler, the other ones should be middleware that can and should be shared among different routes.'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1050ms [SGR] Found relevant: False [SGR] Key findings: ['context.go:205: // IsAborted returns true if the current context was aborted.'] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1202ms [SGR] Found relevant: True [SGR] Key findings: ['gin.go:51: type HandlerFunc func(*Context)'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 771ms [SGR] Found relevant: True [SGR] Key findings: ['context.go:56: const abortIndex int8 = math.MaxInt8 >> 1'] [SGR] Confidence: high [SGR] Need more: True [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 3087ms [SGR] Summary: When `c.Abort()` is called within a Gin middleware, it signals that the request should not proceed f... [SGR] Code locations: 3 [SGR] Confidence: high [SGR] [Tool] read_file: context.go [SGR] [Tool] read_file: context.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: gin.go [SGR] [Tool] read_file: gin.go [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: routergroup.go [SGR] [Tool] read_file: routergroup.go [SGR] Search complete: [SGR] Items found: 3 [SGR] Total iterations: 5 [SGR] Total time: 17542ms [SGR] LLM time: 17518ms [SGR] Tool time: 23ms [SGR] Tools used: {'grep': 3, 'read_file': 2} [SGR] Confidence progression: medium → medium → low → medium → high [SGR] High confidence reached at iteration: 5 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_abort_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/gin_abort_steps.md --- RESULTS --- Expected: ['context.go'] Found: ['context.go', 'gin.go', 'routergroup.go'] Matched: ['context.go'] Recall: 100% ================================================================================ Question: codeql_js_function Repo: codeql Query: Find the Functions.qll file that defines the Function class for JavaScript analysis... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 1044, 'CodeQL': 3880, 'JavaScript': 778, 'C': 343, 'C++': 465, 'C#': 806, 'Go': 652, 'Java': 1511, 'Kotlin': 277, 'TypeScript': 76, 'Rust': 339, 'Ruby': 397, 'Swift': 275} [SGR] Primary (detected): CodeQL [SGR] Framework (detected): None [SGR] Top dirs: ['actions', 'change-notes', 'config', 'cpp', 'csharp', 'docs', 'go', 'java', 'javascript', 'misc'] [SGR] Manifests: ['Cargo.toml', 'Cargo.lock', 'actions/ql/test/qlpack.yml', 'actions/ql/extensions/immutable-actions-list/qlpack.yml', 'actions/ql/lib/qlpack.yml'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 718ms [SGR] [Override] Language: Java → CodeQL [SGR] [Smart] Key dirs by source count: ['java/', 'swift/', 'rust/', 'javascript/', 'python/']... [SGR] Final Language: CodeQL [SGR] Final Languages: {'Python': 1044, 'CodeQL': 3880, 'JavaScript': 778, 'C': 343, 'C++': 465, 'C#': 806, 'Go': 652, 'Java': 1511, 'Kotlin': 277, 'TypeScript': 76, 'Rust': 339, 'Ruby': 397, 'Swift': 275} [SGR] Final Framework: None [SGR] Final Type: other [SGR] Final Key dirs: ['java/', 'swift/', 'rust/', 'javascript/', 'python/', 'ruby/', 'go/', 'csharp/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 712ms [SGR] Concepts: ['Function class', 'JavaScript analysis'] [SGR] User problem: The user wants to locate the specific file that contains the definition of the Function class used for JavaScript analysis within the repository. [SGR] What to find: The Functions.qll file that defines the Function class for JavaScript analysis [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: java/ [SGR] [Tool] list_dir: swift/ [SGR] [Tool] list_dir: rust/ [SGR] [Tool] list_dir: javascript/ [SGR] Explored 4 key directories [SGR] Gemini call took 2156ms [SGR] Primary terms: ['Function', 'function', 'JavaScript', 'javascript'] [SGR] Secondary terms: ['Functions.qll', 'ql'] [SGR] Likely files: ['javascript/'] [SGR] Step 2.5: Reading 1 likely files... [SGR] [Tool] read_file: javascript/BUILD.bazel [SGR] [Read] javascript/BUILD.bazel: 0 definitions found [SGR] Extracted 0 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1671ms [SGR] TypedSearchPlan: 2 grep, 0 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: class Function - Find the definition of the Function class within Q [SGR] 2. grep: class Function - Find the definition of the Function class within Q [SGR] 3. glob_search: Functions.qll - Find the Functions.qll file [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob *.qll -m 50 class Function /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/codeql/repo [SGR] [Tool] glob_search: Functions.qll in . [SGR] [Tool] grep: rg --json -C 3 --glob *.qll -m 50 class Function /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/codeql/repo/javascript [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1334ms [SGR] Found relevant: True [SGR] Key findings: ['javascript/ql/lib/semmle/javascript/Classes.qll:1237: class FunctionCallSignature', 'swift/ql/lib/codeql/swift/elements/decl/swift/ql/lib/codeql/swift/generated/decl/Function.qll:11: final class Function', 'swift/ql/lib/codeql/swift/generated/decl/Function.qll:22: class Function', 'swift/ql/lib/codeql/swift/generated/Raw.qll:883: class Function'] [SGR] Confidence: high [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1419ms [SGR] Found relevant: True [SGR] Key findings: ['javascript/ql/lib/semmle/javascript/Expr.qll:830: class FunctionExpr extends @function_expr, Expr, Function', 'javascript/ql/lib/semmle/javascript/dataflow/internal/VariableTypeInference.qll:645: abstract class FunctionWithAnalyzedParameters extends Function', 'javascript/ql/lib/semmle/javascript/dataflow/Nodes.qll:485: class FunctionNode extends DataFlow::ValueNode, DataFlow::SourceNode'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 655ms [SGR] Found relevant: True [SGR] Key findings: ['javascript/ql/lib/semmle/javascript/Functions.qll:13: class Function'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 944ms [SGR] Summary: The `Function` class for JavaScript analysis is defined in the `javascript/ql/lib/semmle/javascript/... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: javascript/ql/lib/semmle/javascript/Functions.qll [SGR] [Tool] read_file: javascript/ql/lib/semmle/javascript/Functions.qll [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 10911ms [SGR] LLM time: 10522ms [SGR] Tool time: 389ms [SGR] Tools used: {'grep': 2, 'glob_search': 1} [SGR] Confidence progression: high → medium → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/codeql_js_function_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/codeql_js_function_steps.md --- RESULTS --- Expected: ['javascript/ql/lib/semmle/javascript/Functions.qll'] Found: ['javascript/ql/lib/semmle/javascript/Functions.qll'] Matched: ['javascript/ql/lib/semmle/javascript/Functions.qll'] Recall: 100% ================================================================================ Question: codeql_js_call Repo: codeql Query: Find the Expr.qll file that defines CallExpr class for JavaScript call expressions... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 1044, 'CodeQL': 3880, 'JavaScript': 778, 'C': 343, 'C++': 465, 'C#': 806, 'Go': 652, 'Java': 1511, 'Kotlin': 277, 'TypeScript': 76, 'Rust': 339, 'Ruby': 397, 'Swift': 275} [SGR] Primary (detected): CodeQL [SGR] Framework (detected): None [SGR] Top dirs: ['actions', 'change-notes', 'config', 'cpp', 'csharp', 'docs', 'go', 'java', 'javascript', 'misc'] [SGR] Manifests: ['Cargo.toml', 'Cargo.lock', 'actions/ql/test/qlpack.yml', 'actions/ql/extensions/immutable-actions-list/qlpack.yml', 'actions/ql/lib/qlpack.yml'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1846ms [SGR] [Override] Language: Java → CodeQL [SGR] [Smart] Key dirs by source count: ['java/', 'swift/', 'rust/', 'javascript/', 'python/']... [SGR] Final Language: CodeQL [SGR] Final Languages: {'Python': 1044, 'CodeQL': 3880, 'JavaScript': 778, 'C': 343, 'C++': 465, 'C#': 806, 'Go': 652, 'Java': 1511, 'Kotlin': 277, 'TypeScript': 76, 'Rust': 339, 'Ruby': 397, 'Swift': 275} [SGR] Final Framework: None [SGR] Final Type: other [SGR] Final Key dirs: ['java/', 'swift/', 'rust/', 'javascript/', 'python/', 'ruby/', 'go/', 'csharp/', 'actions/', 'config/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 794ms [SGR] Concepts: ['CallExpr class', 'JavaScript call expressions'] [SGR] User problem: The user wants to locate the specific file where the `CallExpr` class for JavaScript call expressions is defined. [SGR] What to find: The Expr.qll file that defines the CallExpr class for JavaScript call expressions [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: java/ [SGR] [Tool] list_dir: swift/ [SGR] [Tool] list_dir: rust/ [SGR] [Tool] list_dir: javascript/ [SGR] Explored 4 key directories [SGR] Gemini call took 1990ms [SGR] Primary terms: ['Expr', 'JavaScript', 'CallExpr', 'expr.qll'] [SGR] Secondary terms: ['javascript', 'call'] [SGR] Likely files: ['javascript/ql/src/expressions/CallExpr.qll'] [SGR] [Path validation] Removed 1 invalid paths: ['javascript/ql/src/expressions/CallExpr.qll']... [SGR] [Fallback] likely_files empty, using key_directories: ['java/', 'swift/', 'rust/'] [SGR] Step 2.5: Reading 3 likely files... [SGR] [Tool] read_file: java/BUILD.bazel [SGR] [Read] java/BUILD.bazel: 0 definitions found [SGR] [Tool] read_file: swift/.clang-format [SGR] [Read] swift/.clang-format: 0 definitions found [SGR] [Tool] read_file: swift/.gitignore [SGR] [Read] swift/.gitignore: 0 definitions found [SGR] [Tool] read_file: swift/.pep8 [SGR] [Read] swift/.pep8: 0 definitions found [SGR] [Tool] read_file: rust/BUILD.bazel [SGR] [Read] rust/BUILD.bazel: 0 definitions found [SGR] [Tool] read_file: rust/README.md [SGR] [Read] rust/README.md: 0 definitions found [SGR] [Tool] read_file: rust/bulk_generation_targets.yml [SGR] [Read] rust/bulk_generation_targets.yml: 0 definitions found [SGR] Extracted 0 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 2030ms [SGR] TypedSearchPlan: 2 grep, 1 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 4 (from TypedSearchPlan) [SGR] 1. grep: class CallExpr - Find the CallExpr class definition within Expr.qll [SGR] 2. grep: JavaScript - Find mentions of JavaScript within Expr.qll [SGR] 3. read_file: Expr.qll - Read the Expr.qll file to understand its contents, [SGR] 4. glob_search: Expr.qll - Find the file named Expr.qll [SGR] [Path validation] Invalid: Path 'Expr.qll' does not exist. Similar existing paths: swift/ql/lib/codeql/swift/generated/expr/Expr.qll, swift/ql/lib/codeql/swift/elements/expr/Expr.qll, rust/ql/lib/codeql/rust/elements/internal/generated/Expr.qll, go/ql/lib/semmle/go/Expr.qll, cpp/ql/lib/semmle/code/cpp/exprs/Expr.qll [SGR] [Path validation] 1 invalid paths, asking LLM for correction... [SGR] LLM text call took 881ms [SGR] [Path corrected] LLM fixed path to: swift/ql/lib/codeql/swift/generated/expr/Expr.qll [SGR] [Path corrected] LLM fixed path to: swift/ql/lib/codeql/swift/elements/expr/Expr.qll [SGR] [Path corrected] LLM fixed path to: cpp/ql/lib/semmle/code/cpp/exprs/Expr.qll [SGR] Executing 6 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob Expr.qll -m 50 class CallExpr /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/codeql/repo [SGR] [Tool] grep: rg --json -C 3 --glob Expr.qll -m 50 JavaScript /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/codeql/repo [SGR] [Tool] glob_search: Expr.qll in . [SGR] [Tool] read_file: swift/ql/lib/codeql/swift/generated/expr/Expr.qll [SGR] [Tool] read_file: swift/ql/lib/codeql/swift/elements/expr/Expr.qll [SGR] [Tool] read_file: cpp/ql/lib/semmle/code/cpp/exprs/Expr.qll [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1040ms [SGR] Found relevant: True [SGR] Key findings: ['go/ql/lib/semmle/go/javascript/ql/lib/semmle/javascript/Expr.qll:842: class CallExpr extends CallOrConversionExpr', 'javascript/ql/lib/semmle/javascript/Expr.qll:1078: class CallExpr extends @call_expr, InvokeExpr'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 683ms [SGR] Found relevant: True [SGR] Key findings: ['javascript/ql/lib/semmle/javascript/Expr.qll:186: * Has no result if the expression is in a JavaScript file or in a TypeScript'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 717ms [SGR] Found relevant: True [SGR] Key findings: ['javascript/ql/lib/semmle/javascript/Expr.qll:1078: class CallExpr extends @call_expr, InvokeExpr'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 2034ms [SGR] Summary: The `CallExpr` class for JavaScript call expressions is defined in the `javascript/ql/lib/semmle/jav... [SGR] Code locations: 2 [SGR] Confidence: high [SGR] [Tool] read_file: javascript/ql/lib/semmle/javascript/Expr.qll [SGR] [Tool] read_file: javascript/ql/lib/semmle/javascript/Expr.qll [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 13357ms [SGR] LLM time: 12928ms [SGR] Tool time: 429ms [SGR] Tools used: {'grep': 2, 'glob_search': 1} [SGR] Confidence progression: high → high → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/codeql_js_call_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/codeql_js_call_steps.md --- RESULTS --- Expected: ['javascript/ql/lib/semmle/javascript/Expr.qll'] Found: ['javascript/ql/lib/semmle/javascript/Expr.qll'] Matched: ['javascript/ql/lib/semmle/javascript/Expr.qll'] Recall: 100% ================================================================================ Question: infinigen_blender_util Repo: infinigen Query: Find the blender.py utility file that has mesh primitive creation functions... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 878, 'C++': 46, 'C': 45} [SGR] Primary (detected): Python [SGR] Framework (detected): None [SGR] Top dirs: ['docs', 'infinigen', 'infinigen_examples', 'scripts', 'tests'] [SGR] Manifests: ['requirements.txt', 'pyproject.toml', 'setup.py'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 795ms [SGR] [Smart] Key dirs by source count: ['infinigen/', 'tests/', 'infinigen_examples/']... [SGR] Final Language: Python [SGR] Final Languages: {'Python': 878, 'C++': 46, 'C': 45} [SGR] Final Framework: None [SGR] Final Type: other [SGR] Final Key dirs: ['infinigen/', 'tests/', 'infinigen_examples/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 698ms [SGR] Concepts: ['mesh primitives', 'file utilities'] [SGR] User problem: The user wants to find a specific utility file named blender.py that contains functions for creating mesh primitives. [SGR] What to find: the blender.py file that contains mesh primitive creation functions [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: infinigen/ [SGR] [Tool] list_dir: tests/ [SGR] [Tool] list_dir: infinigen_examples/ [SGR] Explored 3 key directories [SGR] Gemini call took 1392ms [SGR] Primary terms: ['mesh_primitive', 'blender', 'creation'] [SGR] Secondary terms: ['primitive', 'file_utilities'] [SGR] Likely files: ['infinigen/launch_blender.py'] [SGR] Step 2.5: Reading 1 likely files... [SGR] [Tool] read_file: infinigen/launch_blender.py [SGR] [Read] infinigen/launch_blender.py: 1 definitions found [SGR] Extracted 1 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1632ms [SGR] TypedSearchPlan: 2 grep, 0 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: mesh_primitive - Find mesh primitive creation functions [SGR] 2. grep: creation - Find creation functions within blender.py [SGR] 3. glob_search: *blender.py - Find the blender.py file [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob *blender.py -m 50 mesh_primitive /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/infinigen/repo [SGR] [Tool] grep: rg --json -C 3 --glob *blender.py -m 50 creation /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/infinigen/repo [SGR] [Tool] glob_search: *blender.py in . [SGR] Step 3: Interpreting result... [SGR] Gemini call took 557ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 582ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 579ms [SGR] Found relevant: True [SGR] Key findings: ['infinigen/core/util/blender.py'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1778ms [SGR] Summary: The file `infinigen/core/util/blender.py` is the utility file that contains mesh primitive creation ... [SGR] Code locations: 1 [SGR] Confidence: medium [SGR] [Tool] read_file: infinigen/core/util/blender.py [SGR] [Tool] read_file: infinigen/core/util/blender.py [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 8124ms [SGR] LLM time: 8083ms [SGR] Tool time: 41ms [SGR] Tools used: {'grep': 2, 'glob_search': 1} [SGR] Confidence progression: low → low → high [SGR] High confidence reached at iteration: 3 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/infinigen_blender_util_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/infinigen_blender_util_steps.md --- RESULTS --- Expected: ['infinigen/core/util/blender.py'] Found: ['infinigen/core/util/blender.py'] Matched: ['infinigen/core/util/blender.py'] Recall: 100% ================================================================================ Question: infinigen_seed Repo: infinigen Query: Find the init.py file where apply_scene_seed function sets numpy random seed... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 878, 'C++': 46, 'C': 45} [SGR] Primary (detected): Python [SGR] Framework (detected): None [SGR] Top dirs: ['docs', 'infinigen', 'infinigen_examples', 'scripts', 'tests'] [SGR] Manifests: ['requirements.txt', 'pyproject.toml', 'setup.py'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1376ms [SGR] [Smart] Key dirs by source count: ['infinigen/', 'tests/', 'infinigen_examples/', 'scripts/']... [SGR] Final Language: Python [SGR] Final Languages: {'Python': 878, 'C++': 46, 'C': 45} [SGR] Final Framework: other [SGR] Final Type: other [SGR] Final Key dirs: ['infinigen/', 'tests/', 'infinigen_examples/', 'scripts/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 1010ms [SGR] Concepts: ['numpy random seed', 'apply_scene_seed function', 'init.py file'] [SGR] User problem: The user wants to find the specific file `init.py` where a function `apply_scene_seed` is located and potentially modifies the numpy random seed. [SGR] What to find: The init.py file where the apply_scene_seed function sets the numpy random seed [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: infinigen/ [SGR] [Tool] list_dir: tests/ [SGR] [Tool] list_dir: infinigen_examples/ [SGR] [Tool] list_dir: scripts/ [SGR] Explored 4 key directories [SGR] Gemini call took 1762ms [SGR] Primary terms: ['apply_scene_seed', 'numpy', 'seed'] [SGR] Secondary terms: ['__init__', 'random'] [SGR] Likely files: ['infinigen/core/init.py', 'infinigen_examples/__init__.py'] [SGR] Step 2.5: Reading 2 likely files... [SGR] [Tool] read_file: infinigen/core/init.py [SGR] [Read] infinigen/core/init.py: 8 definitions found [SGR] [Tool] read_file: infinigen_examples/__init__.py [SGR] Extracted 8 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1213ms [SGR] TypedSearchPlan: 1 grep, 1 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 2 (from TypedSearchPlan) [SGR] 1. grep: def apply_scene_seed - Find the apply_scene_seed function [SGR] 2. read_file: infinigen/core/__init__.py - Examine init.py for numpy random seed setting [SGR] Executing 2 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 --glob **/__init__.py -m 50 def apply_scene_seed /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/infinigen/repo [SGR] [Tool] read_file: infinigen/core/__init__.py [SGR] Step 3: Interpreting result... [SGR] Gemini call took 543ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 528ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Gemini call took 826ms [SGR] Gemini call took 925ms [SGR] Gemini call took 1077ms [SGR] [Aggregation] 3 valid actions, 0 stop, 0 invalid [SGR] Iteration 3: grep [SGR] [Tool] grep: rg --json -C 3 -m 50 numpy.random.seed /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/infinigen/repo/infinigen/core/__init__.py [SGR] Step 3: Interpreting result... [SGR] Gemini call took 914ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Gemini call took 893ms [SGR] Gemini call took 1192ms [SGR] Gemini call took 1283ms [SGR] [Aggregation] 3 valid actions, 0 stop, 0 invalid [SGR] Iteration 4: grep [SGR] [Tool] grep: rg --json -C 3 -m 50 numpy.random.seed /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/infinigen/repo/infinigen/core/__init__.py [SGR] Step 3: Interpreting result... [SGR] Gemini call took 760ms [SGR] Found relevant: True [SGR] Key findings: ['infinigen/core/__init__.py:152: find_config'] [SGR] Confidence: high [SGR] Need more: True [SGR] High confidence with relevant findings - stopping search [SGR] Step 5: Generating final answer... [SGR] Gemini call took 2827ms [SGR] Summary: The `apply_scene_seed` function is defined in `infinigen/core/__init__.py`. However, the provided se... [SGR] Code locations: 1 [SGR] Confidence: low [SGR] [Tool] read_file: infinigen/core/__init__.py [SGR] [Tool] read_file: infinigen/core/__init__.py [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 4 [SGR] Total time: 17347ms [SGR] LLM time: 13390ms [SGR] Tool time: 3957ms [SGR] Tools used: {'grep': 3, 'read_file': 1} [SGR] Confidence progression: low → low → low → high [SGR] High confidence reached at iteration: 4 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/infinigen_seed_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/infinigen_seed_steps.md --- RESULTS --- Expected: ['infinigen/core/init.py'] Found: ['infinigen/core/__init__.py'] Matched: [] Recall: 0% ================================================================================ Question: qgis_project_layer Repo: QGIS Query: Find qgsproject.cpp where addMapLayer function adds layers to the project... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 1056, 'C++': 1263, 'C': 1127, 'TypeScript': 38, 'JavaScript': 10} [SGR] Primary (detected): C++ [SGR] Framework (detected): Vue [SGR] Top dirs: ['cmake', 'cmake_templates', 'debian', 'doc', 'editors', 'external', 'i18n', 'images', 'linux', 'ms-windows'] [SGR] Manifests: ['requirements.txt', 'setup.cfg', 'resources/server/src/landingpage/yarn.lock', 'resources/server/src/landingpage/package.json'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1389ms [SGR] [Smart] Priority dir: src/ (1400 source files) [SGR] [Smart] Key dirs by source count: ['src/', 'external/', 'python/', 'scripts/', 'i18n/']... [SGR] Final Language: C++ [SGR] Final Languages: {'Python': 1056, 'C++': 1263, 'C': 1127, 'TypeScript': 38, 'JavaScript': 10} [SGR] Final Framework: Qt [SGR] Final Type: other [SGR] Final Key dirs: ['src/', 'external/', 'python/', 'scripts/', 'i18n/', 'tests/', 'resources/', 'cmake/', 'images/', 'platform/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 623ms [SGR] Concepts: ['qgsproject.cpp', 'addMapLayer function', 'adding layers to project'] [SGR] User problem: [SGR] What to find: the location of addMapLayer function in qgsproject.cpp [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: src/ [SGR] [Tool] list_dir: external/ [SGR] [Tool] list_dir: python/ [SGR] [Tool] list_dir: scripts/ [SGR] Explored 4 key directories [SGR] Gemini call took 1315ms [SGR] Primary terms: ['QgsProject', 'addMapLayer', 'project', 'layer'] [SGR] Secondary terms: ['qgsproject', 'addLayer'] [SGR] Likely files: ['src/', 'python/core/project.py', 'python/common/qgis_sip_project.py'] [SGR] [Path validation] Removed 1 invalid paths: ['python/core/project.py']... [SGR] Step 2.5: Reading 2 likely files... [SGR] [Tool] read_file: src/CMakeLists.txt [SGR] [Read] src/CMakeLists.txt: 0 definitions found [SGR] [Tool] read_file: src/Qgis.xsd [SGR] [Read] src/Qgis.xsd: 0 definitions found [SGR] [Tool] read_file: python/common/qgis_sip_project.py [SGR] [Read] python/common/qgis_sip_project.py: 8 definitions found [SGR] Extracted 8 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1600ms [SGR] TypedSearchPlan: 1 grep, 1 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: addMapLayer - Find the addMapLayer function definition [SGR] 2. read_file: src/core/qgsproject.cpp - Examine the addMapLayer function in qgsproject.cpp [SGR] 3. glob_search: *qgsproject.cpp - Find all files named qgsproject.cpp [SGR] [Path fix] src/core/qgsproject.cpp → src/core/project/qgsproject.cpp [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 addMapLayer /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/QGIS/repo/src [SGR] [Tool] read_file: src/core/project/qgsproject.cpp [SGR] [Tool] glob_search: *qgsproject.cpp in src/ [SGR] Step 3: Interpreting result... [SGR] Gemini call took 3319ms [SGR] Found relevant: True [SGR] Key findings: ['src/app/layers/qgsapplayerhandling.h:147: static void addMapLayer( QgsMapLayer *mapLayer, bool addToLegend = true );', 'src/app/layers/qgsapplayerhandling.cpp:504: QgsProject::instance()->addMapLayers( layersToAdd );', 'src/app/layers/qgsapplayerhandling.cpp:582: QgsProject::instance()->addMapLayer( layer.get(), addToLegend );', 'src/app/layers/qgsapplayerhandling.cpp:807: QgsProject::instance()->addMapLayer( layer.release(), false );', 'src/app/layers/qgsapplayerhandling.cpp:820: QgsProject::instance()->addMapLayer( layer.release(), addToLegend );', 'src/app/layers/qgsapplayerhandling.cpp:1185: void QgsAppLayerHandling::addMapLayer( QgsMapLayer *mapLayer, bool addToLegend )', 'src/app/layers/qgsapplayerhandling.cpp:1192: QgsProject::instance()->addMapLayer( mapLayer, addToLegend );', 'src/app/layers/qgsapplayerhandling.cpp:1337: QgsProject::instance()->addMapLayers( myList );', 'src/app/layers/qgsapplayerhandling.cpp:1482: QgsProject::instance()->addMapLayer( result.first(), addToLegend );', 'src/app/layers/qgsapplayerhandling.cpp:1654: return qobject_cast<QgsVectorLayer *>( QgsProject::instance()->addMapLayer( newVl.release() ) );'] [SGR] Confidence: high [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1225ms [SGR] Found relevant: True [SGR] Key findings: ['src/core/project/qgsproject.cpp:line 1185: void QgsProject::addMapLayer(QgsMapLayer *mapLayer, bool addToLegend)'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 868ms [SGR] Found relevant: True [SGR] Key findings: ['src/core/project/qgsproject.cpp:line 1185: void QgsProject::addMapLayer(QgsMapLayer *mapLayer, bool addToLegend)'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1100ms [SGR] Summary: The `addMapLayer` function is defined in `src/core/project/qgsproject.cpp` and is responsible for ad... [SGR] Code locations: 2 [SGR] Confidence: high [SGR] [Tool] read_file: src/core/project/qgsproject.cpp [SGR] [Tool] read_file: src/core/project/qgsproject.cpp [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: src/app/layers/qgsapplayerhandling.cpp [SGR] [Tool] read_file: src/app/layers/qgsapplayerhandling.cpp [SGR] Search complete: [SGR] Items found: 2 [SGR] Total iterations: 3 [SGR] Total time: 12210ms [SGR] LLM time: 11918ms [SGR] Tool time: 292ms [SGR] Tools used: {'grep': 1, 'read_file': 1, 'glob_search': 1} [SGR] Confidence progression: high → high → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/qgis_project_layer_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/qgis_project_layer_steps.md --- RESULTS --- Expected: ['src/core/project/qgsproject.cpp'] Found: ['src/core/project/qgsproject.cpp', 'src/app/layers/qgsapplayerhandling.cpp'] Matched: ['src/core/project/qgsproject.cpp'] Recall: 100% ================================================================================ Question: qgis_coordinate_transform Repo: QGIS Query: Find qgscoordinatetransform.cpp file with QgsCoordinateTransform class... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'Python': 1056, 'C++': 1263, 'C': 1127, 'TypeScript': 38, 'JavaScript': 10} [SGR] Primary (detected): C++ [SGR] Framework (detected): Vue [SGR] Top dirs: ['cmake', 'cmake_templates', 'debian', 'doc', 'editors', 'external', 'i18n', 'images', 'linux', 'ms-windows'] [SGR] Manifests: ['requirements.txt', 'setup.cfg', 'resources/server/src/landingpage/yarn.lock', 'resources/server/src/landingpage/package.json'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 907ms [SGR] [Override] Framework: None → Vue [SGR] [Smart] Priority dir: src/ (1400 source files) [SGR] [Smart] Key dirs by source count: ['src/', 'external/', 'python/', 'scripts/', 'i18n/']... [SGR] Final Language: C++ [SGR] Final Languages: {'Python': 1056, 'C++': 1263, 'C': 1127, 'TypeScript': 38, 'JavaScript': 10} [SGR] Final Framework: Vue [SGR] Final Type: other [SGR] Final Key dirs: ['src/', 'external/', 'python/', 'scripts/', 'i18n/', 'tests/', 'resources/', 'cmake/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 628ms [SGR] Concepts: ['QgsCoordinateTransform class'] [SGR] User problem: The user is looking for the location of a specific file, qgscoordinatetransform.cpp, which contains the QgsCoordinateTransform class. [SGR] What to find: The file qgscoordinatetransform.cpp containing the QgsCoordinateTransform class. [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: src/ [SGR] [Tool] list_dir: external/ [SGR] [Tool] list_dir: python/ [SGR] [Tool] list_dir: scripts/ [SGR] Explored 4 key directories [SGR] Gemini call took 2003ms [SGR] Primary terms: ['QgsCoordinateTransform', 'qgscoordinatetransform.cpp', 'qgscoordinatetransform.h'] [SGR] Secondary terms: ['transform', 'coordinate'] [SGR] Likely files: ['src/core/'] [SGR] Step 2.5: Reading 1 likely files... [SGR] [Tool] read_file: src/core/CMakeLists.txt [SGR] [Read] src/core/CMakeLists.txt: 0 definitions found [SGR] [Tool] read_file: src/core/fromencodedcomponenthelper.cpp [SGR] [Read] src/core/fromencodedcomponenthelper.cpp: 0 definitions found [SGR] [Tool] read_file: src/core/fromencodedcomponenthelper.h [SGR] [Read] src/core/fromencodedcomponenthelper.h: 0 definitions found [SGR] Extracted 0 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 2044ms [SGR] TypedSearchPlan: 1 grep, 2 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 4 (from TypedSearchPlan) [SGR] 1. grep: class QgsCoordinateTransform - Find the definition of QgsCoordinateTransform clas [SGR] 2. read_file: src/core/qgscoordinatetransform.h - Read the header file for QgsCoordinateTransform to [SGR] 3. read_file: src/core/qgscoordinatetransform.cpp - Read the implementation file for QgsCoordinateTran [SGR] 4. glob_search: qgscoordinatetransform.cpp - Find the qgscoordinatetransform.cpp file. [SGR] [Path fix] src/core/qgscoordinatetransform.h → src/core/proj/qgscoordinatetransform.h [SGR] [Path fix] src/core/qgscoordinatetransform.cpp → src/core/proj/qgscoordinatetransform.cpp [SGR] Executing 4 initial actions in parallel... [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.h [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.cpp [SGR] [Tool] grep: rg --json -C 3 -m 50 class QgsCoordinateTransform /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/QGIS/repo/src/core [SGR] [Tool] glob_search: qgscoordinatetransform.cpp in . [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1992ms [SGR] Found relevant: True [SGR] Key findings: ['src/core/proj/qgscoordinatetransform_p.h:43: class QgsCoordinateTransformPrivate : public QSharedData', 'src/core/proj/qgscoordinatetransform.h:29: class QgsCoordinateTransformPrivate;', 'src/core/qgsgrouplayerrenderer.h:36: class QgsCoordinateTransform;', 'src/core/proj/qgscoordinatetransformcontext.h:40: * \\class QgsCoordinateTransformContext', 'src/core/layout/qgslayoutitemmapgrid.h:29: class QgsCoordinateTransform;'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1713ms [SGR] Found relevant: True [SGR] Key findings: ['src/core/proj/qgscoordinatetransform.h:38: * \\brief Handles coordinate transforms between two coordinate systems.', 'src/core/proj/qgscoordinatetransform.h:29: class QgsCoordinateTransformPrivate;'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 924ms [SGR] Found relevant: True [SGR] Key findings: ['src/core/proj/qgscoordinatetransform.cpp:17: #include "qgscoordinatetransform.h"', 'src/core/proj/qgscoordinatetransform.cpp:39: #include <proj.h>'] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1566ms [SGR] Summary: The file `qgscoordinatetransform.cpp` contains the implementation of the `QgsCoordinateTransform` cl... [SGR] Code locations: 2 [SGR] Confidence: high [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.cpp [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.cpp [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.h [SGR] [Tool] read_file: src/core/proj/qgscoordinatetransform.h [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 2 [SGR] Total iterations: 3 [SGR] Total time: 14406ms [SGR] LLM time: 12290ms [SGR] Tool time: 2116ms [SGR] Tools used: {'grep': 1, 'read_file': 2} [SGR] Confidence progression: medium → high → high [SGR] High confidence reached at iteration: 2 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/qgis_coordinate_transform_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/qgis_coordinate_transform_steps.md --- RESULTS --- Expected: ['src/core/proj/qgscoordinatetransform.cpp'] Found: ['src/core/proj/qgscoordinatetransform.cpp', 'src/core/proj/qgscoordinatetransform.h'] Matched: ['src/core/proj/qgscoordinatetransform.cpp'] Recall: 100% ================================================================================ Question: claude_flow_create_agent Repo: claude-flow Query: How do I create a new agent to work on a task?... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'JavaScript': 1125, 'Python': 210, 'TypeScript': 464} [SGR] Primary (detected): JavaScript [SGR] Framework (detected): Express [SGR] Top dirs: ['analysis-reports', 'assets', 'benchmark', 'bin', 'claude-flow-wiki', 'dist-cjs', 'docker', 'docker-test', 'docs', 'examples'] [SGR] Manifests: ['package-lock.json', 'package.json', 'benchmark/requirements.txt', 'benchmark/setup.py', 'benchmark/hive-mind-benchmarks/requirements.txt'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1293ms [SGR] [Smart] Priority dir: src/ (610 source files) [SGR] [Smart] Key dirs by source count: ['src/', 'dist-cjs/', 'benchmark/', 'bin/', 'examples/']... [SGR] Final Language: JavaScript [SGR] Final Languages: {'JavaScript': 1125, 'Python': 210, 'TypeScript': 464} [SGR] Final Framework: Express [SGR] Final Type: web_framework [SGR] Final Key dirs: ['src/', 'dist-cjs/', 'benchmark/', 'bin/', 'examples/', 'tests/', 'scripts/', 'docs/', 'docker/', 'docker-test/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 582ms [SGR] Concepts: ['agent creation', 'task assignment'] [SGR] User problem: The user wants to know how to create a new agent and assign it to a task. [SGR] What to find: The code or instructions for creating a new agent and defining its task. [SGR] Question type: how_to_use [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: src/ [SGR] [Tool] list_dir: dist-cjs/ [SGR] [Tool] list_dir: benchmark/ [SGR] [Tool] list_dir: bin/ [SGR] Explored 4 key directories [SGR] Gemini call took 2586ms [SGR] Primary terms: ['agent', 'task', 'create', 'assign'] [SGR] Secondary terms: ['agent-manager', 'agent-registry', 'cli'] [SGR] Likely files: ['src/agents/', 'src/cli/', 'bin/agent.js'] [SGR] Step 2.5: Reading 3 likely files... [SGR] [Tool] read_file: src/agents/agent-loader.ts [SGR] [Read] src/agents/agent-loader.ts: 4 definitions found [SGR] [Tool] read_file: src/agents/agent-manager.ts [SGR] [Read] src/agents/agent-manager.ts: 9 definitions found [SGR] [Tool] read_file: src/agents/agent-registry.ts [SGR] [Read] src/agents/agent-registry.ts: 4 definitions found [SGR] [Tool] read_file: src/cli/cli-core.ts [SGR] [Read] src/cli/cli-core.ts: 4 definitions found [SGR] [Tool] read_file: src/cli/command-registry.js [SGR] [Read] src/cli/command-registry.js: 0 definitions found [SGR] [Tool] read_file: src/cli/commander-fix.ts [SGR] [Read] src/cli/commander-fix.ts: 0 definitions found [SGR] [Tool] read_file: bin/agent.js [SGR] [Read] bin/agent.js: 5 definitions found [SGR] Extracted 26 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1569ms [SGR] TypedSearchPlan: 3 grep, 2 read, 0 list, 0 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 5 (from TypedSearchPlan) [SGR] 1. grep: create agent - Find code related to creating agents [SGR] 2. grep: assign task to agent - Find code related to assigning tasks to agents [SGR] 3. grep: agent.create - Find agent creation commands in bin scripts [SGR] 4. read_file: src/cli/commands/agent.js - Understand agent creation commands [SGR] 5. read_file: src/agents/agent-manager.js - Understand agent management and task assignment [SGR] [Path validation] Invalid: Path 'src/cli/commands/agent.js' does not exist. Similar existing paths: bin/agent.js, dist-cjs/src/cli/simple-commands/agent.js, dist-cjs/src/hive-mind/core/Agent.js, dist-cjs/src/cli/commands/agent.js, src/cli/simple-commands/agent.js [SGR] [Path fix] src/agents/agent-manager.js → dist-cjs/src/agents/agent-manager.js [SGR] [Path validation] 1 invalid paths, asking LLM for correction... [SGR] LLM text call took 567ms [SGR] [Path corrected] LLM fixed path to: src/cli/simple-commands/agent.js [SGR] Executing 5 initial actions in parallel... [SGR] [Tool] grep: rg --json -C 3 -m 50 assign task to agent /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/claude-flow/repo/src/agents [SGR] [Tool] grep: rg --json -C 3 --glob *.js -m 50 agent.create /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/claude-flow/repo/bin [SGR] [Tool] grep: rg --json -C 3 -m 50 create agent /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/claude-flow/repo/src/agents [SGR] [Tool] read_file: dist-cjs/src/agents/agent-manager.js [SGR] [Tool] read_file: src/cli/simple-commands/agent.js [SGR] Step 3: Interpreting result... [SGR] Gemini call took 666ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 779ms [SGR] Found relevant: False [SGR] Key findings: [] [SGR] Confidence: low [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1086ms [SGR] Found relevant: True [SGR] Key findings: ['bin/agent.js:152: console.log(` Created: ${new Date(agent.createdAt).toLocaleString()}`)', "bin/mcp-integration-layer.js:118: 'daa_agent_create'", "bin/enhanced-ui-views.js:348: { key: '1', tool: 'daa_agent_create', desc: 'Create dynamic agent' }", "bin/mcp.js:231: console.log(' • daa_agent_create Create dynamic agents')", "bin/hive-mind/mcp-wrapper.js:93: 'daa_agent_create'"] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 862ms [SGR] Found relevant: True [SGR] Key findings: ['dist-cjs/src/agents/agent-manager.js:4: AgentManager class', 'dist-cjs/src/agents/agent-manager.js:21: constructor for AgentManager', 'dist-cjs/src/agents/agent-manager.js:37-41: agentDefaults mentioned'] [SGR] Confidence: medium [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 909ms [SGR] Found relevant: True [SGR] Key findings: ['src/cli/simple-commands/agent.js:37: await createAgent(subArgs, flags)'] [SGR] Confidence: high [SGR] Need more: True [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 2716ms [SGR] Summary: To create a new agent, you can use the `createAgent` function, which is likely called from a CLI com... [SGR] Code locations: 2 [SGR] Confidence: medium [SGR] [Tool] read_file: src/cli/simple-commands/agent.js [SGR] [Tool] read_file: src/cli/simple-commands/agent.js [SGR] [Tool] (cache hit) [SGR] [Tool] read_file: dist-cjs/src/agents/agent-manager.js [SGR] [Tool] read_file: dist-cjs/src/agents/agent-manager.js [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 2 [SGR] Total iterations: 5 [SGR] Total time: 13805ms [SGR] LLM time: 13772ms [SGR] Tool time: 33ms [SGR] Tools used: {'grep': 3, 'read_file': 2} [SGR] Confidence progression: low → low → medium → medium → high [SGR] High confidence reached at iteration: 5 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/claude_flow_create_agent_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/claude_flow_create_agent_steps.md --- RESULTS --- Expected: ['src/agents/agent-manager.ts'] Found: ['src/cli/simple-commands/agent.js', 'dist-cjs/src/agents/agent-manager.js'] Matched: [] Recall: 0% ================================================================================ Question: claude_flow_message_bus Repo: claude-flow Query: Find the message-bus.ts file that has MessageBus class for sending messages... ================================================================================ [SGR] Step 0: Analyzing repository context (smart)... [SGR] [Tool] analyze_repo_smart: scanning repository... [SGR] Languages found: {'JavaScript': 1125, 'Python': 210, 'TypeScript': 464} [SGR] Primary (detected): JavaScript [SGR] Framework (detected): Express [SGR] Top dirs: ['analysis-reports', 'assets', 'benchmark', 'bin', 'claude-flow-wiki', 'dist-cjs', 'docker', 'docker-test', 'docs', 'examples'] [SGR] Manifests: ['package-lock.json', 'package.json', 'benchmark/requirements.txt', 'benchmark/setup.py', 'benchmark/hive-mind-benchmarks/requirements.txt'] [SGR] [Tool] list_dir: . [SGR] Gemini call took 1622ms [SGR] [Smart] Priority dir: src/ (610 source files) [SGR] [Smart] Key dirs by source count: ['src/', 'dist-cjs/', 'benchmark/', 'bin/', 'examples/']... [SGR] Final Language: JavaScript [SGR] Final Languages: {'JavaScript': 1125, 'Python': 210, 'TypeScript': 464} [SGR] Final Framework: Express [SGR] Final Type: web_framework [SGR] Final Key dirs: ['src/', 'dist-cjs/', 'benchmark/', 'bin/', 'examples/', 'tests/', 'scripts/', 'docs/'] [SGR] Step 1: Analyzing question concepts... [SGR] Gemini call took 988ms [SGR] Concepts: ['message bus', 'sending messages'] [SGR] User problem: The user wants to find the file containing the MessageBus class responsible for sending messages. [SGR] What to find: The message-bus.ts file that has the MessageBus class [SGR] Question type: where_is_it [SGR] Step 2: Extracting technical terms... [SGR] Exploring actual directory structure... [SGR] [Tool] list_dir: . [SGR] [Tool] list_dir: src/ [SGR] [Tool] list_dir: dist-cjs/ [SGR] [Tool] list_dir: benchmark/ [SGR] [Tool] list_dir: bin/ [SGR] Explored 4 key directories [SGR] Gemini call took 1593ms [SGR] Primary terms: ['message-bus', 'MessageBus', 'communication'] [SGR] Secondary terms: ['send', 'publish'] [SGR] Likely files: ['src/communication/message-bus.ts'] [SGR] Step 2.5: Reading 1 likely files... [SGR] [Tool] read_file: src/communication/message-bus.ts [SGR] [Read] src/communication/message-bus.ts: 19 definitions found [SGR] Extracted 19 findings from likely files [SGR] Step 3: Creating search plan... [SGR] Gemini call took 1288ms [SGR] TypedSearchPlan: 1 grep, 1 read, 0 list, 1 glob [SGR] Strategy: keyword_hunt [SGR] Actions: 3 (from TypedSearchPlan) [SGR] 1. grep: class MessageBus - Find the MessageBus class definition within messag [SGR] 2. read_file: src/communication/message-bus.ts - Read the MessageBus class file to understand its i [SGR] 3. glob_search: message-bus.ts - Find the message-bus.ts file [SGR] Executing 3 initial actions in parallel... [SGR] [Tool] read_file: src/communication/message-bus.ts [SGR] [Tool] (cache hit) [SGR] [Tool] grep: rg --json -C 3 --glob message-bus.ts -m 50 class MessageBus /Users/mix0z/PycharmProjects/Semantic-Search-MCP/data/issues/claude-flow/repo/src/communication [SGR] [Tool] glob_search: message-bus.ts in src/communication/ [SGR] Step 3: Interpreting result... [SGR] Gemini call took 824ms [SGR] Found relevant: True [SGR] Key findings: ['src/communication/message-bus.ts:214: export class MessageBus extends EventEmitter {', 'src/communication/message-bus.ts:1409: class MessageBusMetrics {'] [SGR] Confidence: high [SGR] Need more: False [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1368ms [SGR] Found relevant: True [SGR] Key findings: ['src/communication/message-bus.ts:214: export class MessageBus extends EventEmitter {', 'src/communication/message-bus.ts:1409: class MessageBusMetrics {'] [SGR] Confidence: high [SGR] Need more: True [SGR] Step 3: Interpreting result... [SGR] Gemini call took 1011ms [SGR] Found relevant: True [SGR] Key findings: ['src/communication/message-bus.ts:214: export class MessageBus extends EventEmitter {', 'src/communication/message-bus.ts:1409: class MessageBusMetrics {', "src/communication/message-bus.ts:179: Found interface 'TopicSubscription'", "src/communication/message-bus.ts:190: Found interface 'RoutingRule'", "src/communication/message-bus.ts:199: Found interface 'RoutingAction'"] [SGR] Confidence: high [SGR] Need more: False [SGR] High confidence with relevant findings - preparing answer [SGR] Step 5: Generating final answer... [SGR] Gemini call took 1003ms [SGR] Summary: The `MessageBus` class, responsible for sending messages, is located in the file `src/communication/... [SGR] Code locations: 1 [SGR] Confidence: high [SGR] [Tool] read_file: src/communication/message-bus.ts [SGR] [Tool] read_file: src/communication/message-bus.ts [SGR] [Tool] (cache hit) [SGR] Search complete: [SGR] Items found: 1 [SGR] Total iterations: 3 [SGR] Total time: 9878ms [SGR] LLM time: 9847ms [SGR] Tool time: 31ms [SGR] Tools used: {'grep': 1, 'read_file': 1, 'glob_search': 1} [SGR] Confidence progression: high → high → high [SGR] High confidence reached at iteration: 1 Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/claude_flow_message_bus_detailed.json /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/claude_flow_message_bus_steps.md --- RESULTS --- Expected: ['src/communication/message-bus.ts'] Found: ['src/communication/message-bus.ts'] Matched: ['src/communication/message-bus.ts'] Recall: 100% ================================================================================ SUMMARY ================================================================================ django_model_save: recall=100%, time=9646ms django_login_required: recall=100%, time=15146ms django_404_view: recall=100%, time=9320ms gin_basic_routing: recall=100%, time=10322ms gin_json_render: recall=100%, time=15121ms gin_abort: recall=100%, time=17542ms codeql_js_function: recall=100%, time=10911ms codeql_js_call: recall=100%, time=13357ms infinigen_blender_util: recall=100%, time=8124ms infinigen_seed: ERROR - None qgis_project_layer: recall=100%, time=12210ms qgis_coordinate_transform: recall=100%, time=14406ms claude_flow_create_agent: ERROR - None claude_flow_message_bus: recall=100%, time=9878ms Successful: 12/14 Average recall: 100% Average time: 12165ms Logs saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355 Comparison report saved to: /Users/mix0z/PycharmProjects/Semantic-Search-MCP/logs/sgr_runs/20251207_202355/comparison_report.md