Reactome MCP Server

MIT License

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search_pathways

Use this tool to identify biological pathways by querying pathway names, processes, or keywords. Specify entity type and result count for precise searches via Reactome MCP Server.

Instructions

Search for biological pathways by name, description, or keywords

Input Schema

Name	Required	Description
`query`	Yes	Search query (pathway name, process, keywords)
`size`	No	Number of results to return (1-100, default: 20)
`type`	No	Type of entity to search for (default: pathway)

Input Schema (JSON Schema)

{
  "properties": {
    "query": {
      "description": "Search query (pathway name, process, keywords)",
      "type": "string"
    },
    "size": {
      "description": "Number of results to return (1-100, default: 20)",
      "maximum": 100,
      "minimum": 1,
      "type": "number"
    },
    "type": {
      "description": "Type of entity to search for (default: pathway)",
      "enum": [
        "pathway",
        "reaction",
        "protein",
        "complex",
        "disease"
      ],
      "type": "string"
    }
  },
  "required": [
    "query"
  ],
  "type": "object"
}

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