Skip to main content
Glama

Reactome MCP Server

Server Configuration

Describes the environment variables required to run the server.

NameRequiredDescriptionDefault

No arguments

Schema

Prompts

Interactive templates invoked by user choice

NameDescription

No prompts

Resources

Contextual data attached and managed by the client

NameDescription

No resources

Tools

Functions exposed to the LLM to take actions

NameDescription
search_pathways

Search for biological pathways by name, description, or keywords

get_pathway_details

Get comprehensive information about a specific pathway

find_pathways_by_gene

Find all pathways containing a specific gene or protein

find_pathways_by_disease

Find disease-associated pathways and mechanisms

get_pathway_hierarchy

Get hierarchical structure and parent/child relationships for a pathway

get_pathway_participants

Get all molecules (proteins, genes, compounds) participating in a pathway

get_pathway_reactions

Get all biochemical reactions within a pathway

get_protein_interactions

Get protein-protein interactions within pathways

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/Augmented-Nature/Reactome-MCP-Server'

If you have feedback or need assistance with the MCP directory API, please join our Discord server