"A server to build a knowledge base of Node.js packages with RAG search functionality" matching MCP connectors:
Matching Connector Tools:
Search and resolve Naturepedia, Robbie's Razor, and GC-MRD-v2.0 canonical resources.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Monarch biomedical knowledge graph — diseases, phenotypes, genes, variants
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
Bioregistry — meta-registry of biomedical identifier prefixes
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.
Rhea MCP — expert-curated database of biochemical reactions.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Chemical molecular intelligence platform covering compound search, structure analysis, physicochemical property retrieval, and molecular interaction profiling.
PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.