"A database for genomic and biological data (Ensembl)" matching MCP servers:

An extensible MCP server for database operations that supports PostgreSQL for managing schemas, tables, data, and user permissions. It features automatic migration recording for DDL changes and integrates with various AI-powered editors like Cursor, Zed, and Claude Code.

Provides agents with real Linux VMs to run commands, manage files, expose ports, and track costs, all through an ephemeral sandbox service.

Enables AI agents to invoke a local Stata installation, including a Windows Stata build under Wine on Linux and macOS, for regression analysis, econometrics, paper replication, and empirical research with command guards, resource monitoring, and automatic log capture.

Enables Large Language Models to access and manipulate Autodesk Revit models through a pyRevit-based bridge and the Model Context Protocol.

Local MCP server that registers restricted Python filters and runs them against local JSON, YAML, and TXT files, enabling safe data filtering and file conversion.

Gives LLM agents spatial awareness inside Autodesk Maya, enabling scene inspection and measurement, aesthetic and engineering audits, camera planning, checkpoint/rollback safety, asset import, and viewport or render previews. Agents can also execute arbitrary Python in Maya to build and verify 3D scenes against engineering rules instead of writing blind.

A Model Context Protocol server that enables Claude to load CSV files and execute JavaScript data analysis scripts for advanced data exploration and insights generation.

Enable Claude (or any other LLM) to interactively debug your code (set breakpoints and evaluate expressions in stack frame). It's language-agnostic, assuming debugger console support and valid launch.json for debugging in VSCode.

A server that helps people access and query data in databases using the Query Runner with integration of the Model Context Protocol (MCP) Python SDK. Support databases including PostgreSQL Redshift MySQL Microsoft SQL Server Google APIs Amazon Web Services (via boto3) CockroachDB SQLite

MCP server that gives AI agents isolated, named Linux computers with stable IDs and lifecycle control. Supports multiple backends like Docker, Fly Machines, Modal, and E2B, with a dashboard for managing sandboxes.

Enables Claude Code to work with personal data that stays on the local machine, running SQL, Python, and file/schema inspection in a sandboxed compute-to-data setup that returns only aggregates, schemas, synthetic fixtures, and pseudonymized results. Raw records, file names, and protected values never reach the Anthropic API, so Auto mode can stay hands-off.

A TypeScript-based MCP server that enables LLM agents to interact with Gel databases through natural language, providing tools to learn database schemas, validate and execute EdgeQL queries.

A Python server implementing the Model Context Protocol to provide customizable prompt templates, resources, and tools that enhance LLM interactions in the continue.dev environment.

Gives AI assistants full control over Microsoft Access databases, enabling creation and management of forms, VBA, tables, queries, and more through natural language.

An MCP server that provides data bridging from Spring Boot interfaces and a lightweight Python sandbox for script execution. It enables agents to fetch data as Markdown or Parquet files and perform automated data analysis within a controlled environment.

A FastMCP server implementation that provides a standardized interface for accessing AI models hosted on Replicate's API, currently supporting image generation with customizable parameters.

A production-ready foundation template for building Model Context Protocol (MCP) servers with FastAPI, featuring modular tools, comprehensive testing, and OpenShift deployment configurations. Includes automated transformation scripts to create custom domain-specific MCP servers.

A starter template for creating MCP servers that work with Puch AI, featuring ready-to-use tools for job searching and image processing. Includes examples for Bearer token authentication, OAuth integration with Google and GitHub, and demonstrates user-scoped data management.

A Model Context Protocol server providing read-only access to MySQL databases, enabling LLMs to inspect database schemas and execute read-only queries.

Enables AI assistants to operate directly inside a running Unity Editor project, using built-in tools for scene creation, script generation, play mode automation, input simulation, and performance analysis.