"Using MySQL Database with Cursor Functionality" matching MCP servers:

MCP server for the STRING protein–protein interaction database, hosted by STRING at mcp.string-db.org. Adapted for LLM grounding: responses are size-limited and include metadata and notes on interpretation and next steps. Tools cover identifier resolution, interaction networks and evidence, functional and PPI enrichment, and sequence similarity search.

Enables AI agents to query free biomedical and pharmaceutical APIs for clinical trials, drug data, molecular structures, adverse events, and research literature.

Public read-only MCP server providing structured access to Atlarium habitat data and advisory functions for aquariums, terrariums, and related systems.

Provides oncology data (research, news, FDA approvals, clinical trials) and IBM MAMMAL biomedical predictions (PPI, DTI, ClinTox) as MCP tools. Allows AI agents to query cancer datasets and run predictions through a remote MCP server.

Enables searching the NIAID Data Ecosystem for biomedical research resources including datasets, clinical studies, and publications using Elasticsearch queries.

Enables natural language queries about Swiss mandatory health insurance coverage for medications and medical devices using official BAG lists.

Enables querying Brazilian PCDT clinical protocols from Conitec and generating concise, context-specific treatment summaries using a local LLM, with verified literal citations and links to official PDFs.

An MCP server that lets an LLM answer a pharmacist's question about drug shortages by normalizing drug names, finding pharmacologic alternatives, and checking their shortage status using public FDA and NLM data.

Monitors PubMed and medRxiv for configurable research topics, summarizes papers using a local LLM, and stores deduplicated results in a local database.

Enables querying Anvisa's open data for drug registration status and recent medical devices, with heuristic AI-use classification using a locally hosted LLM.

Provides interpretable variant effect predictions for 4.2 million ClinVar variants using the EVEE API. Enables searching, comparing, and analyzing genetic variants with AI-generated mechanistic interpretations and disruption profiles.

Enables MCP-compatible agents to answer open questions about NHS provider performance using live waiting-time data from RTT and My Planned Care, supplemented by CQC quality ratings.

Enables coding agents to interact with the Reactome pathway database, including search, lookup, hierarchy traversal, SBML/SBGN export, and gene-set enrichment analysis.

Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

Enables validation of clinical notes in SOAP format, checking required fields and semantic coherence using a local LLM, all processed locally with no data leaving the machine.

Connects OpenEvidence to MCP clients for authenticated research queries using your browser session.

Enables natural language querying of EFSA's OpenFoodTox database containing 8,006 chemical substances with toxicity data, safety assessments, risk limits, and genotoxicity studies for food additives, pesticides, and contaminants.

Mock MCP server for pediatric CKD risk warning, enabling patient biochemical trend retrieval, deterministic risk rule evaluation, structured alert triggering, and clinical SOP lookup using simulated data.

Search 200M+ patents and scientific literature in natural language using PatSnap's global R&D intelligence database.

Provides live US healthcare cost data including procedure cost estimates, provider pricing, insurance coverage rules, and medical bill analysis using real hospital transparency and CMS data.

Enables searching biomedical images (X-rays, CT/MRI, clinical photos, etc.) from the Open-i database using natural language queries, returning image results as Markdown links.

Enables analysis of clinical trial protocols using MCP tools for document listing, entity extraction, adverse event clustering, and summarization.

Generates family pedigree tree diagrams as PNG or SVG images using standard genetic notation compliant with Bennett 2008/2022 NSGC guidelines. Supports comprehensive genealogical features including conditions, genetic testing results, twin relationships, carrier status, and adoption indicators.

Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.

Provides safe read-only access to synthetic healthcare data via FHIR R4, enabling AI assistants to search patients, retrieve vitals, and summarize conditions using a public sandbox.

Enables AI agents and applications to search, retrieve, and analyze chemical compounds, substances, and bioassays from PubChem's vast chemical information database through comprehensive tools for chemical research and discovery.

MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.

Enables read-only FHIR access to Practice Fusion EHR to search patients, appointments, conditions, medications, and lab results.

Enables conversational access to 400,000+ clinical trials on ClinicalTrials.gov, allowing users to search, compare, and retrieve trial details using plain English through MCP-compatible clients like Cursor and Claude Desktop.

Enables AI coding agents to search and retrieve official CryoSPARC documentation with version awareness, using a local prebuilt index for safe and fast access.