"Running MySQL Queries Through a MySQL Socket" matching MCP servers:

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

Enables LLM agents to query de-identified FHIR-shaped hospital data through audited, read-only tools for patients, encounters, conditions, observations, medications, and interaction checks, while any medication write stays a draft that a clinician must confirm out-of-band.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Enables querying roughly 3.2 million measured protein–ligand binding affinities from a local, read-only DuckDB build of the BindingDB MySQL dump, with tools for searching compounds and targets, retrieving potency and selectivity profiles, fetching activity records with assay and citation details, and running read-only SQL.

An open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.

Enables searching the NIAID Data Ecosystem for biomedical research resources including datasets, clinical studies, and publications using Elasticsearch queries.

Enables natural language queries about Swiss mandatory health insurance coverage for medications and medical devices using official BAG lists.

Enables language models to search biomedical literature, fetch sequences, and follow links across Entrez databases through eleven read-only tools wrapping the nine NCBI Entrez E-utilities. It handles URL building, pacing, redirects, response caps, and API-key redaction so queries can be answered without a browser or scraping.

A structure-aware MCP server for querying the SPOKE biomedical knowledge graph, enabling entity resolution, schema introspection, path finding, and safe Cypher queries for biomedical knowledge inference.

An MCP server for longevity and metabolic medicine that provides a medication catalog, dosing protocols, contraindication screening, drug interaction checks, lab recommendations, and patient intake pathways across 35 compounds.

Provides direct SQL access to a locally hosted Reactome database, enabling schema discovery, guarded read-only queries, and ergonomic helpers over the full relational schema.

Connects OpenEvidence to MCP clients for authenticated research queries using your browser session.

Enables searching biomedical images (X-rays, CT/MRI, clinical photos, etc.) from the Open-i database using natural language queries, returning image results as Markdown links.

Enables agents to interact with a clinic booking API, including listing specialties, doctors, and a patient's appointments, and booking or cancelling appointments when the active profile permits, while preserving the caller's authority and screening tool descriptions for safety.

Provides real-time Dexcom CGM glucose data to MCP clients via the unofficial Share API, enabling queries like current glucose and recent readings within the last 24 hours.

A Claude Code extension that embeds a senior athenahealth integration engineer in your development workflow, proactively catching data loss bugs and guiding safe DataView queries and API integrations.

Enables LLMs to search LOINC terms with free-text, relevance-ranked, and faceted queries via the LOINC Search API, mirroring the loinc.org/search experience.

An MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.

Enables LLM agents to search biomedical literature, retrieve article details, find related papers, manage caching, and download open-access full texts through MCP with structured, agent-friendly responses.

Enables LLM-based agents to interact with FHIR healthcare data through natural language prompts, providing full CRUD operations on FHIR resources, document processing, and semantic search capabilities.