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  • FHIR MCP Server

    the-momentum
    A
    license
    A
    quality
    D
    maintenance
    Enables LLM-based agents to interact with FHIR healthcare data through natural language prompts, providing full CRUD operations on FHIR resources, document processing, and semantic search capabilities.
    13
    97
    MIT

  • Define-XML MCP Server

    defineEditor
    F
    license
    A
    quality
    D
    maintenance
    A TypeScript MCP server for interacting with CDISC Define-XML 2.0 and 2.1 files, enabling users to load, search, and retrieve clinical data metadata including datasets, variables, and codelists. It supports local file processing with document caching and provides responses in both JSON and Markdown formats.
    13

  • mnova-mcp

    cyx1874cyx
    A
    license
    A
    quality
    C
    maintenance
    MCP server for MestReNova 15 that enables processing 1D NMR data, importing ChemDraw structures, running Mnova Verify, and writing back assignments with audit trails.
    4
    1
    MIT

  • eeg-mcp

    AImplifier
    A
    license
    A
    quality
    B
    maintenance
    A Model Context Protocol server that provides AI agents with a unified interface for real-time EEG acquisition, replay, processing, visualization, recording, and stimulation from over 66 BrainFlow boards.
    47
    BSD 3-Clause

  • open-dental-mcp

    sanjibani
    A
    license
    A
    quality
    B
    maintenance
    Enables interaction with Open Dental practice management software, allowing reading of patients, appointments, providers, procedures, and recalls, as well as writing communications back to patient charts via MCP clients.
    14
    3
    MIT

  • chimerax-mcp-plus

    N283T
    A
    license
    B
    quality
    C
    maintenance
    MCP server for controlling UCSF ChimeraX molecular visualization software, enabling command execution, screenshots, structure analysis reports, and session management.
    27
    2
    MIT

  • biopharma-mcp

    SEOSiri-Official
    A
    license
    B
    quality
    A
    maintenance
    MCP server for biopharma software infrastructure offering FDA 21 CFR Part 11 audit trails, CDISC SDTM/Allotrope data exports, 4PL dose-response curve fitting, and HIPAA PII/PHI redaction through 10 Zod-validated tools.
    10
    MIT

  • PubMed Advanced MCP Server

    SuyashEkhande
    A
    license
    B
    quality
    D
    maintenance
    This MCP server provides 16 intelligent tools for searching, retrieving, and linking biomedical literature from PubMed and PMC. It enables LLM applications to perform complex queries, batch processing, and cross-database linking.
    16
    8
    MIT

  • Enhanced Miyabi MCP Server

    mo666-med
    F
    license
    B
    quality
    F
    maintenance
    Automatically analyzes and dispatches user tasks to appropriate handlers, supporting development task processing via Miyabi Agent and medical AI academic article generation. Provides intelligent task classification and routing for development, writing, and general tasks.
    4

  • gromacs-mcp

    Alierkn
    A
    license
    B
    quality
    A
    maintenance
    Enables running GROMACS molecular dynamics simulations through natural language, with tools for topology building, solvation, simulation management, and trajectory processing via the Model Context Protocol.
    31
    MIT
  • Bio-MCP FastQC Server by bio-mcp

    Bio-MCP FastQC Serverofficial

    bio-mcp
    A
    license
    -
    quality
    C
    maintenance
    Enables AI assistants to perform quality control analysis on high-throughput sequencing data using FastQC and MultiQC. It supports single-file and batch processing of FASTQ/FASTA files and generates comprehensive, interactive summary reports.
    MIT

  • PubMed MCP Server

    aglitch120
    A
    license
    -
    quality
    D
    maintenance
    Enables comprehensive biomedical literature research through PubMed database access with advanced search, full-text retrieval, citation analysis, and batch processing capabilities. Supports both local deployment and cloud hosting for seamless integration with AI assistants.
    1
    MIT

  • ChemMCP

    cassiusoat
    A
    license
    -
    quality
    D
    maintenance
    A chemistry computation platform providing 19 professional tools for molecular structure processing, including SMILES conversions, molecular calculations, functional group identification, visualization, and AI-powered molecule generation and description.
    2
    Apache 2.0