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maintenanceEnables AI agents to query free biomedical and pharmaceutical APIs for clinical trials, drug data, molecular structures, adverse events, and research literature.
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"Building a Sequencer with Arduino in C++ and Enhancing Performance" matching MCP servers:
- AlicenseAqualityCmaintenanceEnables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.Last updated91MIT
- Alicense-qualityDmaintenanceAn open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.Last updated19MIT
- Alicense-qualityCmaintenanceEnables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).Last updated2LGPL 3.0
- AlicenseAqualityAmaintenanceAn MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.Last updated15MIT
- AlicenseAqualityAmaintenanceGrounds gene-nomenclature work in the HUGO Gene Nomenclature Committee (HGNC) dataset, enabling resolution of gene symbols and IDs to canonical HGNC identifiers, plus cross-references and batch operations.Last updated9MIT
- FlicenseAqualityBmaintenanceTransBench is a translational research agent that takes free-text clinical observations, decomposes them into biological axes, generates falsifiable hypotheses grounded in PubMed evidence, and designs reproducible computational experiments with concrete datasets for Claude Science.Last updated3
- AlicenseAqualityDmaintenanceA Model Context Protocol (MCP) server for interacting with Gen3 data commons, with GraphQL query validation to reduce hallucinations.Last updated54MIT
- AlicenseAqualityBmaintenanceMCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.Last updated17MIT
- AlicenseAqualityBmaintenanceProvides phenotype-aware cardiovascular triage tools including FHIR R5 case retrieval, missing-data analysis, ECGFounder-backed ECG interpretation, risk summarization, and structured SBAR handoff in multiple languages.Last updated6MIT
- AlicenseAqualityDmaintenanceA Model Context Protocol (MCP) server for searching the National Provider Identifier (NPI) registry. This server provides tools to search and retrieve information about healthcare providers and organizations in the United States.Last updated14PythonMIT
- FlicenseAqualityCmaintenanceEnables AI coding agents to search and retrieve official CryoSPARC documentation with version awareness, using a local prebuilt index for safe and fast access.Last updated3
PDBe MCP Serversofficial
AlicenseAqualityAmaintenanceProvides seamless access to the Protein Data Bank in Europe (PDBe) API and search capabilities, enabling AI clients to query protein structures, perform advanced searches, and retrieve structural biology data.Last updated3336Apache 2.0- AlicenseAqualityCmaintenanceEnables biopharma catalyst research by aggregating signals from ClinicalTrials.gov, PubMed, SEC EDGAR, openFDA, and Yahoo Finance, with a single tool to audit a ticker/drug combination and return a forensic verdict.Last updated10693ISC
- AlicenseAqualityBmaintenanceUpload your raw DNA file from 23andMe, AncestryDNA, MyHeritage, FamilyTreeDNA, or any VCF -- and watch a team of AI agents fan out across 16+ public genomics databases, share discoveries with each other in real time, and produce a comprehensive health report. Everything runs on your machine. Nothing is uploaded anywhere.Last updated2416MIT
- FlicenseAqualityDmaintenanceA TypeScript MCP server for interacting with CDISC Define-XML 2.0 and 2.1 files, enabling users to load, search, and retrieve clinical data metadata including datasets, variables, and codelists. It supports local file processing with document caching and provides responses in both JSON and Markdown formats.Last updated13
- AlicenseAqualityBmaintenanceA drug and clinical information MCP server for Turkish healthcare professionals, integrating TİTCK, SGK, openFDA, and PubMed data with ChatGPT and Claude.Last updated181MIT
- AlicenseAqualityCmaintenanceA Claude-compatible MCP server that exposes health-domain tools over 100% synthetic data, built with security and compliance in mind.Last updated4MIT
- FlicenseAqualityCmaintenanceExposes four CMS public datasets as callable tools in Claude conversations, enabling natural-language real-world evidence analytics without SQL expertise.Last updated6
- FlicenseAqualityDmaintenanceProvides access to the Human Phenotype Ontology (HPO) API with tools for searching, browsing hierarchy, and analyzing phenotypic terms used in genetic research.Last updated12