"Automated cleanup tools" matching MCP servers:

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

Enables automated assessment of research manuscripts against the TARGET reporting guideline for target trial emulation, providing item-by-item scoring with evidence and provenance.

MCP server for automated ICD-10 medical coding. Code clinical text to ICD-10-CM diagnoses, search 74,000+ codes, and de-identify PHI via the AutoICD API.

Enables AI agents to analyze synthetic biomarker panels via Phi Longevity's PRISM clinical recommendation engine, providing tiered, guideline-cited recommendations. Also offers tools to list supported biomarkers and retrieve methodology.

Enables analysis of clinical trial protocols using MCP tools for document listing, entity extraction, adverse event clustering, and summarization.

MCP server that exposes the UniProt REST API to LLM clients, enabling search and retrieval of protein data via tools like search_uniprotkb, get_entry, and map_ids.

Exposes a clinic's knowledge base and structured records to Claude Desktop as callable tools, with read tools grounded with citations and write tools gated behind approval.

Enables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.

A Claude Code extension that embeds a senior athenahealth integration engineer in your development workflow, proactively catching data loss bugs and guiding safe DataView queries and API integrations.

Enables AI-assisted molecular biology experiment design with tools for qPCR primer design, cloning strategy optimization, TaqMan probe design, and multiplex compatibility analysis.

A local MCP server enabling PubMed, PMC, and iCite API access via stdio for tools like search, fetch, full text, and citation counts.

Provides seamless integration with FHIR APIs, enabling AI/LLM tools to search, retrieve, and analyze clinical healthcare data with support for SMART-on-FHIR authentication and multiple transport protocols.

A Model Context Protocol (MCP) server for searching the National Provider Identifier (NPI) registry. This server provides tools to search and retrieve information about healthcare providers and organizations in the United States.

Provides validated clinical scoring tools for AI agents via MCP, with evidence-based calculators and smart tool discovery.

Enables AI agents to control Fiji/ImageJ for microscopy image analysis through natural language commands, supporting operations like image opening, filtering, particle analysis, and automated workflows.

Patient Safety AI - MCP server providing AI-powered tools and automation by MEOK AI Labs

AI-powered HEOR (Health Economics and Outcomes Research) MCP server with 7 tools for literature search across 41 medical data sources, cost-effectiveness modeling (Markov/PartSA/PSA), and HTA dossier preparation for NICE, EMA, FDA, IQWiG, HAS, and EU JCA submissions.

Provides local DNA/RNA sequence analysis tools (composition, reverse complement, translation, ORF enumeration, motif scanning) via MCP for agent workflows.

Provides infant health references including WHO growth percentiles, NIP vaccine schedules, and national checkup schedules as tools for LLMs.

A local-first MCP server that provides fast access to OpenEMR wiki pages, users guide, and selected API documentation through tools like search, page retrieval, and category listing.