"Apache Parquet" matching MCP servers:

Enables AI assistants to upload clinical documents and medical device images for health data extraction, normalization, and retrieval of structured coded results in formats such as JSON, FHIR, HL7, CSV, and Parquet.

Reads raw lab-instrument files (microscopy, mass spectrometry, chromatography, flow cytometry, NMR, electrophysiology, spectroscopy, plate readers, qPCR) without vendor software, returning metadata, images, spectra and traces as JSON. It also checks files for damage, runs common analyses, and exports to open formats such as OME-TIFF, OME-Zarr, mzML, Parquet and NWB.

Three composable MCP servers for clinical AI — FHIR R4 read/search/validate, medical terminology (LOINC/SNOMED/RxNorm/ICD-10), and drug safety reasoning (interactions, dose check, allergy). Apache-2.0, production-ready.

Read-only biomedical MCP server connecting PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB, Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch Initiative, GWAS Catalog, and more. One command grammar for all biomedical entities — genes, variants, diseases, drugs, trials, articles, phenotypes, pathways, proteins, diagnostics, and adverse events. 27 tools. Apache-2.0 license.