A
license-
qualityC
maintenanceEnables querying the gnomAD genome aggregation database for variant, gene, and region information.
9
MIT
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"author:pipeworx-io" matching MCP servers:
- Alicense-qualityCmaintenanceMCP server for querying the GWAS Catalog (EBI/NHGRI), a curated catalog of genome-wide association studies. It enables AI agents to search and retrieve study data via natural language or direct tool calls.1MIT
- Alicense-qualityCmaintenanceEnables querying and browsing ontologies from the EBI Ontology Lookup Service, including searching for terms, retrieving term details, and navigating ontology hierarchies via natural language.8MIT
- Alicense-qualityCmaintenanceEnables AI agents to query the PomBase fission yeast model-organism database for genetic and molecular data through the Pipeworx MCP gateway.1MIT
- Alicense-qualityCmaintenanceMCP server for querying gene annotations, full-text gene search, and species taxonomy via MyGene.info. Enables AI agents to access gene data through natural language questions.14MIT
- Alicense-qualityCmaintenanceConnects to NCBI E-utilities for searching, fetching, and linking biological data across Entrez databases.7MIT
- Alicense-qualityCmaintenanceEnables querying of the Monarch Initiative biomedical knowledge graph for genes, diseases, phenotypes, and their associations through natural language or direct tool calls.10MIT
- Alicense-qualityCmaintenanceThis server provides access to InterPro protein family, domain, and functional-site classification data from EBI. It allows querying protein annotations through natural language or direct tool calls.3MIT
- Alicense-qualityCmaintenanceEnables querying Ensembl genomic data including gene lookup, sequence retrieval, homology, variation, and variant effect prediction via MCP tools.12MIT
- Alicense-qualityCmaintenanceMCP server for STRING-DB that enables querying protein-protein interaction networks, functional enrichment, and homology mappings.9MIT
- Alicense-qualityCmaintenanceEnables querying the Human Protein Atlas data using natural language or direct MCP tools, with keyless access via the Pipeworx gateway.3MIT
- Alicense-qualityCmaintenanceEnables querying GTEx gene expression, eQTL, and tissue data through an MCP gateway.9MIT
- Alicense-qualityCmaintenanceEnables querying metadata from MyVariant.info, a comprehensive variant annotation database, providing dataset statistics, source information, and build versions.7MIT
- Alicense-qualityCmaintenanceProvides access to UniProt protein sequence and function knowledge base, enabling search and retrieval of protein entries, proteomes, taxonomy, and feature annotations.6MIT
- Alicense-qualityCmaintenanceProvides tools to query and resolve identifiers from the Bioregistry, including prefix metadata, CURIE resolution, and substring search.9MIT
- Alicense-qualityCmaintenanceProvides access to AlphaFold predicted protein 3D structures from EBI, enabling retrieval of prediction metadata, summaries, annotations, and UniProt data.14MIT
- Alicense-qualityCmaintenanceEnables AI agents to query the WikiPathways open community pathway database via natural language, part of the Pipeworx MCP gateway.1MIT
- Alicense-qualityCmaintenanceEnables querying and retrieving experimental protein structures from the RCSB Protein Data Bank, including text search, full entry records, polymer entities, ligands, and assemblies.21MIT
- Alicense-qualityCmaintenanceEnables querying the EBI Expression Atlas for gene expression data across species and conditions. Part of the Pipeworx gateway, it provides access to baseline and differential expression studies.7MIT
- Alicense-qualityCmaintenanceMCP server for querying the EBI PRIDE Archive, a proteomics (mass-spectrometry) data repository, through natural language or direct tool calls.3MIT