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hb-projectome-mcp

hb-projectome-mcp

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      license
      A
      quality
      B
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      Exposes NeuroGraph's scientific API to AI models as MCP tools, enabling them to query, analyze, and visualize brain networks — regions, tracts, connectivity, literature, and cross-species homologies — drawn from a portable SSD-based neuroimaging data library. Lets models read real atlas data, load datasets, compute graph metrics, and produce visualization scene descriptors without acting as the scientific engine itself.
      12
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    • A
      license
      B
      quality
      D
      maintenance
      Enables LLM agents to query the CZ CELLxGENE Census single-cell atlas with ontology-aware filters, cost caps, and full provenance, allowing natural language questions about cell types, tissues, and gene expression.
      13
      21 PyPI
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    • A
      license
      Not graded
      quality
      C
      maintenance
      Enables Claude, Cursor, or any MCP client to query public Drosophila connectome datasets and run in-silico experiments on them locally, with every answer carrying built-in controls, uncertainty, and provenance. Currently exposes dataset listing with licence, citation, download size, and locally cached level details.
      Apache 2.0
    • F
      license
      Not graded
      quality
      D
      maintenance
      Enables natural language interaction for scRNA-Seq analysis including preprocessing, clustering, and visualization using the CellRank library. It allows users and agents to perform complex genomic data tasks through standard MCP clients and frameworks.
      19 PyPI
      2
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    • A
      license
      Not graded
      quality
      B
      maintenance
      Enables searching and reading public neuroscience data from DANDI, OpenNeuro, NeuroMorpho, Allen, and BrainGlobe directly from a coding agent, including remote NWB slices with license and citation information.
      MIT