gnomAD MCP Server
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Related Servers
- AlicenseNot gradedqualityBmaintenanceEnables querying the gnomAD genome aggregation database for variant, gene, and region information.2 npmMIT
- AlicenseBqualityDmaintenanceProvides a programmatic interface to the Genome Aggregation Database (gnomAD) API across versions v2.1.1, v3.1.2, and v4.1.0. It enables users to query gene metadata, variant information, population frequencies, and ClinVar data through a unified schema.126Apache 2.0
- AlicenseAqualityDmaintenanceEnables AI assistants to interact with the Open Targets Platform API to search and retrieve comprehensive data about target-disease associations, drugs, genes, and drug discovery information through GraphQL queries.537Apache 2.0
- FlicenseBqualityDmaintenanceEnables AI assistants to query and analyze genomics data from the GTEx Portal through 25 specialized tools for gene expression analysis, eQTL/sQTL associations, and genetic variant lookups across 54 human tissue types.253-
- AlicenseCqualityDmaintenanceEnables AI assistants to query gene annotations, expression, pathways, variants, and more via the MyGene.info API, supporting batch operations and multiple biological data sources.26MIT
- AlicenseNot gradedqualityDmaintenanceEnables AI agents to query clinical genomics databases, retrieve supporting literature, analyze population genetics, and visualize biological pathways.18MIT
TDQS
Scored across 9 tools
Most tools have distinct purposes targeting specific genomic entities (e.g., genes, variants, regions), but some overlap exists between 'get_variants_in_gene' and 'get_region_variants' which could cause confusion when querying gene regions. The descriptions help clarify, but the boundaries aren't perfectly clear.
All tool names follow a consistent 'verb_noun' pattern with 'get_' or 'search' prefixes, using snake_case uniformly. This predictability makes it easy for agents to understand and select tools without naming confusion.
With 9 tools, this server is well-scoped for querying genomic data from gnomAD. Each tool serves a specific purpose (e.g., coverage, genes, variants), and the count aligns with the domain's complexity without being overwhelming or insufficient.
The toolset covers core query operations for genes, variants, transcripts, and regions, with a general search function. Minor gaps exist, such as no explicit tools for filtering or aggregating results, but agents can work around this using the provided tools for most workflows.