PaperPilot
Click on "Deploy Server".
Wait a few minutes for the server to deploy. Once ready, it will show a "Started" state.
In the chat, type
@followed by the MCP server name and your instructions, e.g., "@PaperPilotFind recent papers on protein folding with diffusion models and cite them."
That's it! The server will respond to your query, and you can continue using it as needed.
Here is a step-by-step guide with screenshots.
PaperPilot ∢
Research superpowers for AI agents. One MCP server gives any agent instant arXiv + PubMed access with citation-grade extraction.
No scraping. No ads. Wraps the free arXiv and NCBI E-utilities APIs — zero backend risk, zero per-call cost.
Live verification
Tested against both upstream APIs (real responses, this machine):
search_arxiv("CRISPR gene editing", 2)
→ "Primer on the Gene Ontology", Gaudet et al. — https://arxiv.org/pdf/1602.01876v1
search_pubmed("sickle cell CRISPR", 1)
→ JCO Oncol Pract. 2026 Aug 19:OP2600479 — "Translating CRISPR to Practice in the Clinic…"Related MCP server: Research Paper Ingestion MCP Server
Install (30 seconds)
Requires Python ≥ 3.10 and mcp>=1.2,<1.10 (1.9.4 verified).
python3.11 -m venv .venv && . .venv/bin/activate
pip install "mcp>=1.2,<1.10"Add to your Claude / Hermes / Cursor / Codex MCP config:
{
"mcpServers": {
"paperpilot": {
"command": "/path/to/.venv/bin/python",
"args": ["/path/to/paperpilot/server.py"]
}
}
}Then ask your agent: "Find recent papers on protein folding with diffusion models and cite them." It calls PaperPilot.
Tools
Tool | What it does |
| Title, authors, PDF link, summary per paper |
| Full citations + abstracts via E-utilities |
| Clean citation string + PDF for one arXiv id |
Pricing
Free $0 — 5 calls/day, both sources (get started)
Pro $99/mo — unlimited calls, BibTeX export, priority cache
Team $199/mo — 10 agent seats, batch search, white-label API
See landing/index.html for the full sell page. Open a GitHub issue or discussion for Pro/Team provisioning.
Why agent-native?
In the agentic era discovery happens through agents. Whoever the agent reaches for wins. PaperPilot is built to be the tool agents reach for when they need research.
This server cannot be deployed
Maintenance
Related MCP Connectors
Search arXiv/Semantic Scholar/OpenAlex + medical evidence (PubMed/Europe PMC) + LaTeX/PDF tools.
Find academic papers across major sources like arXiv, PubMed, bioRxiv, and more. Download PDFs whe…
Search and download academic papers from arXiv, PubMed, bioRxiv, medRxiv, Google Scholar, Semantic…
Search arXiv and ACL Anthology, retrieve citations and references, and browse web sources to accel…
Related MCP Servers
- AlicenseNot gradedqualityCmaintenanceEnables LLMs to search, analyze, and summarize academic research papers in real-time from arXiv, Semantic Scholar, and PubMed. Provides automatic deduplication, citation analysis, and BibTeX generation across multiple research databases.59 npmMIT
- FlicenseNot gradedqualityCmaintenanceEnables searching, downloading, and analyzing academic papers from arXiv and Semantic Scholar to extract key insights and citation metrics. It facilitates autonomous knowledge acquisition by processing research findings and integrating them into persistent AI memory systems.-
- AlicenseNot gradedqualityCmaintenanceEnables agents to search, analyze, and explore arXiv academic papers with advanced multi-field search, author lookup, category browsing, citation extraction, and bibliography export.22 npmApache 2.0
- AlicenseAqualityDmaintenanceEnables AI agents to search and read PubMed academic literature directly, without requiring an NCBI API key.21MIT