Skip to main content
Glama
glygener

Glygen MCP Server

Official
by glygener
OverviewSchemaRelated ServersScoreDiscussions
Python
Hybrid

Using the MCP server remotely

Assuming you have web based access to AI chat such as Claude - https://claude.ai, use the following steps to connect to the remove GlyGen MCP server (https://mcp.glygen.org/mcp). After you login to https://claude.ai

1. Login to https://claude.ai
2. Go to "Settings" --> "Connectors" --> "Add Custom Connector"
3. Put value "Glygen MCP Server" for the name field
4. Put value "https://mcp.glygen.org/mcp" for server

Related MCP server: BioMCP

Deploying the MCP server on your linux VM

Create MCP container

Run the following command to create the MCP container

$ python3 create_mcp_container.py -s dev

Create service for the container

Edit /usr/lib/systemd/system/docker-glygen-mcp-dev.service and place the following content in it.

[Unit]
Description=GlyGen MCP Server Container (dev)
Requires=docker.service
After=docker.service
[Service]
Restart=always
ExecStart=/usr/bin/docker start -a running_glygen_mcp_dev
ExecStop=/usr/bin/docker stop -t 2 running_glygen_mcp_dev
[Install]
WantedBy=default.target

This will allow you to start/stop the container with the following commands, and ensure that the container will start on server reboot.

   $ sudo systemctl daemon-reload
   $ sudo systemctl enable docker-glygen-mcp-dev.service
   $ sudo systemctl start docker-glygen-mcp-dev.service
   $ sudo systemctl stop docker-glygen-mcp-dev.service

Testing the MCP server

Runn the following commands to test some of the MCP tools

python3 test-endpoint.py -s dev -g protein -n get_protein_summary
python3 test-endpoint.py -s dev -g site -n get_site_summary
python3 test-endpoint.py -s dev -g glycan -n get_glycan_summary
python3 test-endpoint.py -s dev -g biomarker -n get_biomarker_summary
python3 test-endpoint.py -s dev -g disease -n get_disease_summary

This server cannot be installed

F
license - not found
-
quality - not tested
C
maintenance

How are these scores calculated?

Maintenance

–Maintainers
–Response time
–Release cycle
–Releases (12mo)
Commit activity

Resources

Unclaimed servers have limited discoverability.

Looking for Admin?

If you are the server author, to access and configure the admin panel.

Latest Blog Posts

MCP directory API

We provide all the information about MCP servers via our MCP API.

curl -X GET 'https://glama.ai/api/mcp/v1/servers/glygener/glygen-mcp-server'

If you have feedback or need assistance with the MCP directory API, please join our Discord server