cBioPortal MCP Server
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TDQS
Scored across 17 tools
Most tools have distinct purposes targeting specific resources like studies, genes, or clinical data, but there is some overlap between 'get_genes' and 'get_multiple_genes' which could cause confusion, and 'collect_all_results' and 'paginate_results' are both pagination utilities with unclear boundaries.
Tool names follow a consistent verb_noun pattern throughout, such as 'get_cancer_studies', 'search_genes', and 'get_mutations_in_gene', with no deviations in style or convention, making them predictable and readable.
With 17 tools, the count is slightly high but reasonable for a bioinformatics domain like cBioPortal, covering various data retrieval and search operations without feeling excessively bloated.
The tool set provides comprehensive coverage for querying studies, genes, clinical data, and molecular profiles, with minor gaps such as lacking update or delete operations, but this is typical for a read-only API server focused on data retrieval.