embl_data
Retrieve protein domains, families, and features from EMBL-EBI databases. Search InterPro, Pfam, UniProt, and NCBI taxonomy using the method parameter.
Instructions
Access EMBL-EBI bioinformatics APIs including InterPro, Pfam, UniProt protein features, and NCBI taxonomy. Use the "method" parameter to select an operation: search_interpro, get_interpro_entry, get_protein_domains, search_pfam, get_protein_features, search_taxonomy.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Maximum number of results to return (default: 10) | |
| query | No | Search term for search_interpro, search_pfam, or search_taxonomy | |
| method | Yes | The operation to perform | |
| accession | No | InterPro accession (e.g., "IPR000719") for get_interpro_entry | |
| uniprot_id | No | UniProt accession (e.g., "P04637") for get_protein_domains or get_protein_features |