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Allen Brain API MCP Server

by maflot

download_projection_grid_data

Download 3D projection grid data for mouse connectivity experiments as NRRD files by specifying experiment ID, volume type, and resolution.

Instructions

Download 3D projection grid data in NRRD format for mouse connectivity experiments.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
sectionDataSetIdYesSection Data Set (experiment) ID.
imageNoVolume type to download (default: 'projection_density').
resolutionNoVoxel resolution in microns (default: 25).
filePathNoLocal path to save the NRRD file.
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description must carry the burden. It indicates a download operation (read-only), but does not disclose any permissions, rate limits, or side effects. Adequate but not detailed.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence, no wasted words. Could be slightly more structured but is concise and front-loaded.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness2/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

Given 4 parameters and no output schema, the description is minimal. It does not explain return values, file size considerations, or how it differs from get_grid_data_download_url. Incomplete context.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100%, so the schema fully documents parameters. The description does not add extra meaning beyond the schema; baseline is 3.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the verb (download), resource (3D projection grid data), format (NRRD), and domain (mouse connectivity experiments). It is specific and distinguishes from sibling tools like download_expression_grid_data.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides no guidance on when to use this tool vs alternatives, nor any context for when not to use it. No comparisons to siblings are given.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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