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Allen Brain API MCP Server

by maflot

download_expression_grid_data

Download 3D expression grid data as a ZIP archive in metaimage format, with options to include energy, density, and intensity volumes.

Instructions

Download 3D expression grid data as a ZIP archive (metaimage format) containing energy, density, and/or intensity volumes.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
sectionDataSetIdYesSection Data Set ID.
includeNoWhich volumes to include (default: ['energy']).
filePathNoLocal path to save the ZIP file.
Behavior2/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations exist, so the description must disclose behavioral traits. It only states the output format and content, omitting details like auth requirements, file size limits, or synchronous behavior.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Single sentence, no redundancy, all information is relevant. Front-loaded with the action and key details.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a simple download tool with three parameters and no output schema, the description covers the essential information: what is downloaded and in what format. However, it could briefly explain the metaimage format or mention that the filePath parameter decides save location.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100%, so baseline is 3. The description adds minimal meaning beyond the schema (e.g., repeating volume types already in enum). No extra context like format constraints on filePath or default behavior.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description clearly states the verb 'Download', the resource '3D expression grid data', the format 'ZIP archive (metaimage format)', and the content 'energy, density, and/or intensity volumes'. This differentiates it from sibling tools like download_projection_grid_data.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance on when to use this tool versus alternatives (e.g., download_projection_grid_data). No mention of prerequisites, typical use cases, or exclusions.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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