list_datasets

Retrieve all available datasets from a specified biomart in CSV format, including names and descriptions, to explore biological data efficiently.

Instructions

Lists all available biomart datasets for a given mart.

Each mart contains multiple datasets. This function returns all datasets
available in the specified mart as a CSV string.

Args:
    mart (str): The mart identifier to list datasets from.
        Valid values include: ENSEMBL_MART_ENSEMBL, ENSEMBL_MART_MOUSE,
        ENSEMBL_MART_ONTOLOGY, ENSEMBL_MART_GENOMIC, ENSEMBL_MART_SNP,
        ENSEMBL_MART_FUNCGEN

Returns:
    str: CSV-formatted table of all datasets with their display names and descriptions.

Example:
    list_datasets("ENSEMBL_MART_ENSEMBL")
    >>> "name,display_name,description
         hsapiens_gene_ensembl,Human genes,Human genes (GRCh38.p13)
         mmusculus_gene_ensembl,Mouse genes,Mouse genes (GRCm39)
         ..."

Input Schema

Name	Required	Description	Default
`mart`	Yes

Input Schema (JSON Schema)

{
  "properties": {
    "mart": {
      "title": "Mart",
      "type": "string"
    }
  },
  "required": [
    "mart"
  ],
  "title": "list_datasetsArguments",
  "type": "object"
}

Biomart MCP

list_datasets

Instructions

Input Schema

Input Schema (JSON Schema)

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