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Alternatives to fluxforge

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    • A
      license
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      Integrates AlphaFold DB and eight other biomedical data sources into MCP tools for variant clinical reporting, disease-target analysis, structural intelligence, and drug repurposing, with results persisted to a local SQLite knowledge graph.
      30
      4
      Apache 2.0
    • A
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      quality
      A
      maintenance
      Read-only biomedical MCP server connecting PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB, Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch Initiative, GWAS Catalog, and more. One command grammar for all biomedical entities — genes, variants, diseases, drugs, trials, articles, phenotypes, pathways, proteins, diagnostics, and adverse events. 27 tools. Apache-2.0 license.
      1
      Apache 2.0
    • A
      license
      A
      quality
      B
      maintenance
      Pre-clinical drug discovery intelligence MCP server providing 44 tools to query 800+ drug targets, 12K+ compounds, 46K+ papers, 18K+ clinical trials, and 16K+ patents.
      44
      Apache 2.0
    • A
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      quality
      D
      maintenance
      Enables LLMs to directly access and analyze cancer dependency data from the DepMap, including gene search, dependency summaries, and top cell line dependencies, for therapeutic target evidence collection.
      1
      MIT
    • A
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      A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
      19
      AGPL 3.0
    • A
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      quality
      D
      maintenance
      Enables AI agents to query clinical genomics databases, retrieve supporting literature, analyze population genetics, and visualize biological pathways.
      22
      MIT

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