bridge_xref
Map metabolite identifiers across KEGG, HMDB, ChEBI, PubChem, and InChIKey in batch, attaching cross-referenced IDs to user-specified feature entries using BridgeDb.
Instructions
Promote ids across systems via BridgeDb (batch; DB loads once).
Each query: {id, source, targets:[...], feature_id?}. source/target in {kegg,hmdb,chebi,pubchem,inchikey}. If feature_id + workdir are given, bridged ids are attached to that entry as a 'bridgedb' candidate.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| db | No | ||
| queries | Yes | ||
| workdir | Yes |