PDB MCP Server
Related Servers
Alternatives to PDB MCP Server
No user-submitted related servers found.
Related Servers
- AlicenseNot gradedqualityAmaintenanceA Model Context Protocol server providing programmatic access to 3D protein structural data from RCSB PDB, PDBe, and UniProt, enabling search, retrieval, comparison, and analysis of protein structures.143 npm5Apache 2.0
- AlicenseNot gradedqualityDmaintenanceA Model Context Protocol server that enables retrieval of -omics data from sources like PDB, ChEMBL, UniProt, PubChem, and HUGO.5GPL 3.0
- FlicenseBqualityDmaintenanceA comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set of tools and resources for protein structure prediction analysis.1935-
- FlicenseCqualityDmaintenanceA comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.2620-
- FlicenseAqualityDmaintenanceProvides tools to query, retrieve, and download protein structure data from the RCSB Protein Data Bank via the MCP protocol.5-
- FlicenseAqualityDmaintenanceA comprehensive Model Context Protocol (MCP) server for accessing Human Protein Atlas data, providing information about protein expression, subcellular localization, pathology, and more.164-
TDQS
Scored across 5 tools
Each tool has a clearly distinct purpose: downloading structure data, retrieving structure metadata, accessing quality metrics, searching by UniProt ID, and general keyword/ID search. There is no overlap in functionality, making tool selection straightforward for an agent.
All tool names follow a consistent verb_noun pattern with snake_case (e.g., download_structure, get_structure_info, search_by_uniprot). The naming is uniform and predictable across all five tools.
Five tools is well-scoped for a PDB (Protein Data Bank) server, covering core operations like data retrieval, search, and quality assessment without being too sparse or overwhelming. Each tool serves a clear, necessary function.
The toolset provides strong coverage for querying and retrieving PDB structure data, including search, info, quality, and download functions. A minor gap might be the lack of tools for advanced filtering or batch operations, but core workflows are well-supported.