ensembl_regulatory
Retrieve regulatory features, binding matrices, and annotations for genomic regions, proteins, or matrix IDs. Analyze regulatory overlaps and binding data across multiple species.
Instructions
Get regulatory features, binding matrices, and regulatory annotations. Covers regulatory overlap endpoints and binding matrix data.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| binding_matrix_id | No | Binding matrix stable ID (e.g., 'ENSPFM0001', 'ENSPFM0123') | |
| feature_type | No | Type of regulatory feature (e.g., 'RegulatoryFeature', 'MotifFeature', 'TF_binding_site') | |
| protein_id | No | Protein ID for regulatory features affecting translation (e.g., 'ENSP00000288602', 'ENSP00000350283') | |
| region | No | Genomic region in format 'chromosome:start-end' (e.g., '17:7565096-7590856', 'X:1000000-2000000', '6:25000000-35000000') | |
| species | No | Species name (e.g., 'homo_sapiens', 'mus_musculus') | homo_sapiens |