advanced_search

advanced_search

Filter and retrieve protein data using multiple criteria like tissue specificity, subcellular location, cancer prognosis, and antibody reliability from the Human Protein Atlas. Output results in JSON or TSV format.

Instructions

Perform advanced search with multiple filters and criteria

Input Schema

Name	Required	Description
`antibodyReliability`	No	Antibody reliability filter
`cancerPrognostic`	No	Cancer prognostic filter
`chromosome`	No	Chromosome filter
`columns`	No	Specific columns to include in results
`format`	No	Output format (default: json)
`maxResults`	No	Maximum number of results (1-10000, default: 100)
`proteinClass`	No	Protein class filter
`query`	No	Base search query
`subcellularLocation`	No	Subcellular localization filter
`tissueSpecific`	No	Tissue-specific expression filter

Input Schema (JSON Schema)

{
  "properties": {
    "antibodyReliability": {
      "description": "Antibody reliability filter",
      "enum": [
        "approved",
        "enhanced",
        "supported",
        "uncertain"
      ],
      "type": "string"
    },
    "cancerPrognostic": {
      "description": "Cancer prognostic filter",
      "type": "string"
    },
    "chromosome": {
      "description": "Chromosome filter",
      "type": "string"
    },
    "columns": {
      "description": "Specific columns to include in results",
      "items": {
        "type": "string"
      },
      "type": "array"
    },
    "format": {
      "description": "Output format (default: json)",
      "enum": [
        "json",
        "tsv"
      ],
      "type": "string"
    },
    "maxResults": {
      "description": "Maximum number of results (1-10000, default: 100)",
      "maximum": 10000,
      "minimum": 1,
      "type": "number"
    },
    "proteinClass": {
      "description": "Protein class filter",
      "type": "string"
    },
    "query": {
      "description": "Base search query",
      "type": "string"
    },
    "subcellularLocation": {
      "description": "Subcellular localization filter",
      "type": "string"
    },
    "tissueSpecific": {
      "description": "Tissue-specific expression filter",
      "type": "string"
    }
  },
  "required": [],
  "type": "object"
}

ProteinAtlas MCP Server

Instructions

Input Schema

Input Schema (JSON Schema)

Other Tools from ProteinAtlas MCP Server

Related Tools

MCP directory API