"Using SQLite with a database cursor" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
Official STRING database MCP server. Query for protein-protein interactions, enrichment, annotations, homology, and PPI networks.
Read-only MCP connector for The Dose Guy source-linked peptide and compound database. Search 260+ compounds, compare vendors and prices, inspect ranking evidence, and retrieve canonical page links. No authentication required.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, with ClinVar.
Annotate and classify human genetic variants with GeneBe (ACMG, gnomAD, ClinVar). Research use only.
A molecular biology bench for AI assistants: cloning and assembly, PCR and primer design, CRISPR, Sanger verification, qPCR and dPCR, alignment and phylogenetics, genomics, proteins and cheminformatics. Calculated by engines checked against the field's reference tools, with every result explained. No auth, stateless, free.
Agent research API for 15 disease areas, plus a T1D cure lab, sourced evidence ledger and models.
Cancer gene co-occurrence and exclusivity in tumour cohorts, with confound controls and exact tests.
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
HLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
gnomAD MCP — Broad Institute Genome Aggregation Database (GraphQL).
ChEMBL MCP — drug discovery database (EBI).
PubTator 3 MCP — biomedical entity search, literature search with entity
IntAct (EBI) molecular-interaction database MCP. Keyless.
Rhea MCP — expert-curated database of biochemical reactions.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
