"Information about enclave-gateway" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Official answers about Helena Bioinformatics and its products, with citations to public sources.
QuickGO (EBI) MCP — Gene Ontology browser.
Rhea MCP — expert-curated database of biochemical reactions.
IntAct (EBI) molecular-interaction database MCP. Keyless.
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
NCI Thesaurus concepts and the other cancer-research vocabularies served by NCI Enterprise…
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
RCSB PDB MCP — experimentally determined macromolecular structures.
dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…
BioPortal — NCBO's biomedical ontology repository (data.bioontology.org).
UCSC Genome Browser REST API — reference genome assemblies for ~250 species, the annotation tracks…
WikiPathways MCP — open community pathway database.
UniProt MCP — protein sequence + function database.
ChEMBL MCP — drug discovery database (EBI).
UMLS MCP — wraps the NLM UMLS Terminology Services REST API (uts-ws.nlm.nih.gov/rest)
PubTator 3 MCP — biomedical entity search, literature search with entity highlighting, and…
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository. Keyless. Wraps the public…
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
SGD (Saccharomyces Genome Database) MCP.
Human Protein Atlas (HPA) MCP — keyless.
PDBe (Protein Data Bank in Europe, EBI) MCP.
MyVariant.info MCP. Aggregated human genetic-variant annotation: dbSNP, ClinVar clinical…
Mondo — condition-string resolver onto the Mondo Disease Ontology.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
European Nucleotide Archive (ENA) — EMBL-EBI's public record of raw sequencing runs, assemblies…
MGnify — EMBL-EBI's metagenomics resource: public microbiome studies, the biome vocabulary they…
MetaboLights MCP — EBI's metabolomics study repository.