"How to use AppFlowy" matching MCP connectors:

Monarch biomedical knowledge graph — diseases, phenotypes, genes, variants

STRING protein-protein interaction networks across ~12k organisms

Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation

Bioregistry — meta-registry of biomedical identifier prefixes

Broad Institute gnomAD genomic variant database (GraphQL)

GTEx — Genotype-Tissue Expression human gene-expression atlas

Reactome biological pathway database

MyGene.info — gene annotation joining NCBI/Ensembl/UniProt/KEGG/OMIM

UniProt MCP — protein sequence + function database.

RCSB PDB MCP — experimentally determined macromolecular structures.

ChEMBL MCP — drug discovery database (EBI).

AlphaFold DB MCP — predicted protein structures.

IntAct (EBI) molecular-interaction database MCP. Keyless.

EBI BioStudies MCP.

EBI Complex Portal MCP.

QuickGO (EBI) MCP — Gene Ontology browser.

NCI Genomic Data Commons (GDC) MCP.

Rhea MCP — expert-curated database of biochemical reactions.

NCI CACTUS Chemical Identifier Resolver MCP.

KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.