"How to run a Windows command" matching MCP connectors:
GET /v1/connectors — MCP directory API referenceMatching Connector Tools:
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
RCSB PDB MCP — experimentally determined macromolecular structures.
Monarch biomedical knowledge graph — diseases, phenotypes, genes, variants
GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.
Human Protein Atlas (HPA) MCP — keyless.
UniProt MCP — protein sequence + function database.
InterPro MCP (EBI) — protein family / domain / functional-site classification.
Broad Institute gnomAD genomic variant database (GraphQL)
Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation
Bioregistry — meta-registry of biomedical identifier prefixes
ChEMBL MCP — drug discovery database (EBI).
AlphaFold DB MCP — predicted protein structures.
WikiPathways MCP — open community pathway database.
