"How to run a Windows command" matching MCP connectors:
GET /v1/connectors – MCP directory API referenceMatching Connector Tools:
Pharmacogenomics for AI agents: cited drug–gene, gene and rsID lookups plus a medication screen.
Run protein folding, docking, design and sequence analysis tools, and read their results.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Agent research API for 15 disease areas, plus a T1D cure lab, sourced evidence ledger and models.
Find open biology and chemistry AI models, bioinformatics tools and databases, and run them online.
A molecular biology bench for AI assistants: cloning and assembly, PCR and primer design, CRISPR, Sanger verification, qPCR and dPCR, alignment and phylogenetics, genomics, proteins and cheminformatics. Calculated by engines checked against the field's reference tools, with every result explained. No auth, stateless, free.
BioBricks: the site's own MCP server — dataset, enquiry (enquiry = a human handoff, not a...
HLA nomenclature and match checks against a pinned IPD-IMGT/HLA release. No patient identifiers.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
QuickGO (EBI) MCP — Gene Ontology browser.
Rhea MCP — expert-curated database of biochemical reactions.
PubTator 3 MCP — biomedical entity search, literature search with entity highlighting, and…
EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository. Keyless. Wraps the public…
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
IntAct (EBI) molecular-interaction database MCP. Keyless.
SGD (Saccharomyces Genome Database) MCP.
NCBI Datasets — the US National Library of Medicine's genome, gene and taxonomy reference service…
NCI Thesaurus concepts and the other cancer-research vocabularies served by NCI Enterprise…
Human Protein Atlas (HPA) MCP — keyless.
KEGG REST MCP — Kyoto Encyclopedia of Genes and Genomes.
PDBe (Protein Data Bank in Europe, EBI) MCP.
MyVariant.info MCP. Aggregated human genetic-variant annotation: dbSNP, ClinVar clinical…
Mondo — condition-string resolver onto the Mondo Disease Ontology.
RCSB PDB MCP — experimentally determined macromolecular structures.
g:Profiler (University of Tartu) — functional enrichment analysis for a gene list against GO…
European Nucleotide Archive (ENA) — EMBL-EBI's public record of raw sequencing runs, assemblies…
dbSNP refSNP records and HGVS/SPDI/rsID normalization for human genetic variants, from NCBI…
MGnify — EMBL-EBI's metagenomics resource: public microbiome studies, the biome vocabulary they…
