"How to connect to a SQL Server database" matching MCP connectors:
GET /v1/connectors — MCP directory API referenceMatching Connector Tools:
Protein research over UniProtKB — search by function, fetch curated records, map IDs, proteomes.
Look up allele frequencies by ancestry, gene constraint, variants, and coverage over gnomAD.
Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.
Search GBIF species taxonomy, occurrence records, datasets, and publishers.
Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.
Official answers about Helena Bioinformatics and its products, with citations to public sources.
PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.
UniProt MCP — protein sequence + function database.
ChEMBL MCP — drug discovery database (EBI).
WikiPathways MCP — open community pathway database.
Broad Institute gnomAD genomic variant database (GraphQL)
Query STRING interactions, enrichment, annotations, homology, and PPI networks.
Reactome biological pathway database
IntAct (EBI) molecular-interaction database MCP. Keyless.
A unified biomedical graph database that integrates 50+ primary data sources — genes, proteins, compounds, diseases, pathways, and clinical data — into a single queryable graph with billions of cross-reference edges. Its native MCP server gives LLMs direct access to structured, authoritative biomedical data, complementing their reasoning with reliable identifiers and up-to-date database content.
Rhea MCP — expert-curated database of biochemical reactions.
SGD (Saccharomyces Genome Database) MCP.
Chemical molecular intelligence platform covering compound search, structure analysis, physicochemical property retrieval, and molecular interaction profiling.
PatSnap Biology Modality MCP server — access biological sequences, modification records, and antibody-antigen interactions across 200M+ patents.
Serves the user's personal DNA wellness report to their AI: caffeine response, sleep timing, training, nutrient absorption. Built from a hand-checked evidence base (GWAS Catalog, PharmGKB); every finding states its effect size and links to its source paper. No disease risk scores. The raw DNA file is parsed in the user's browser and never uploaded.
