"How to connect through SSL" matching MCP connectors:

MyVariant.info MCP.

PomBase MCP — the fission yeast (Schizosaccharomyces pombe) model-organism database.

RCSB PDB MCP — experimentally determined macromolecular structures.

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

Monarch biomedical knowledge graph — diseases, phenotypes, genes, variants

InterPro MCP (EBI) — protein family / domain / functional-site classification.

EBI Expression Atlas MCP.

UniProt MCP — protein sequence + function database.

Human Protein Atlas (HPA) MCP — keyless.

GWAS Catalog (EBI/NHGRI) MCP — curated catalog of genome-wide association studies.

Ensembl REST — vertebrate genomes, sequences, comparative genomics, variation

Bioregistry — meta-registry of biomedical identifier prefixes

ChEMBL MCP — drug discovery database (EBI).

WikiPathways MCP — open community pathway database.

MetaboLights MCP — EBI's metabolomics study repository.

GTEx — Genotype-Tissue Expression human gene-expression atlas

Broad Institute gnomAD genomic variant database (GraphQL)

STRING protein-protein interaction networks across ~12k organisms

AlphaFold DB MCP — predicted protein structures.

Reactome biological pathway database