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Glama

Gnomad

by io.github.pipeworx-io

Deep Research

deep_research
Read-onlyIdempotent

ACCOUNT REQUIRED (free — sign in via GitHub at https://pipeworx.io/signup; depth:"thorough" needs a paid plan). If you are not signed in, use ask_pipeworx instead — it works on every tier. Grounded multi-source research across Pipeworx's 1517 STRUCTURED data sources (SEC filings, FRED/BLS economics, FDA, USPTO patents, markets, science, government records, etc.) in ONE call — this is NOT open-web search. Decomposes your question into focused facets, routes each to the right one of 5,798 tools IN PARALLEL, and returns a findings packet: verbatim evidence + confidence + source + fetched_at + a stable pipeworx:// citation per finding, with explicit gaps[] for facets the data couldn't answer (never invented). Best for broad/multi-part questions over structured data ("compare X and Y's regulatory + financial exposure", "research the filings + market picture for ACME"). For a single lookup use ask_pipeworx (one LLM call, not many). For BREAKING or colloquial CURRENT-NEWS / "what's the world saying about X" topics, prefer ask_pipeworx — it routes to live news APIs and the *-news-feeds packs; deep_research returns mostly empty gaps[] when the topic isn't in the structured catalog. Second-hop iteration: depth:"standard" re-angles unanswered gaps (gap recovery); depth:"thorough" additionally chases the best leads from the first pass — so multi-step questions resolve in one call. Every finding carries a hop field and a citation_uri — a resolvable pipeworx:// record URI, present only when the source emits one that resources/read can actually serve, so a citation you get back is always fetchable. "standard" and "thorough" also return contradictions[] flagging findings that disagree. Large records are semantically excerpted to the passages relevant to each facet (not head-truncated), so answers deep in a long filing/series aren't missed. Expect 15-60s (thorough with its follow-up + contradiction pass: up to ~90s).

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
depthNoHow many facets to research in parallel: quick=3 (single hop), standard=3 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=6 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan).
questionYesThe research question, in natural language. Broad/multi-part is fine — decomposition is the point.

Schema Changelog

Changes observed during successful MCP inspections. Dates show when Glama detected each change.

  1. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=3 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=6 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."
  2. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus a contradictions[] scan across findings)."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."
  3. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans). \"thorough\" also runs a second ITERATIVE hop — a planner inspects the first-pass findings/gaps and chases the most valuable leads or recovers gaps, resolving multi-step questions in one call."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus a contradictions[] scan across findings)."
  4. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans)."New value: +"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans). \"thorough\" also runs a second ITERATIVE hop — a planner inspects the first-pass findings/gaps and chases the most valuable leads or recovers gaps, resolving multi-step questions in one call."
  5. Added

TDQS

A4.9/5.0
Behavior5/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnly, openWorld, idempotent, and non-destructive hints; the description adds auth and paid-plan requirements, expected latency, gap[]/contradictions[] behavior, fetchable citation_uri semantics, and 'never invented' honesty. It also explains semantic excerpting of large records, giving the agent useful reliability context beyond the annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is long but densely informative; every sentence adds decision-relevant detail such as authentication, latency, output shape, depth differences, and citation guarantees. It is front-loaded with the account requirement and alternative tool, so an agent gets the most critical routing information first.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

There is no output schema, but the description fully compensates by describing the findings packet structure, gaps[], contradictions[], hop/citation_uri fields, semantic excerpting, and latency expectations. Combined with the input schema and annotations, an agent has enough to invoke the tool correctly and interpret its results.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage for both parameters is 100%, so the schema already documents question and depth. The description enriches depth semantics by explaining what each depth level does operationally—quick, standard's gap-recovery hop, thorough's lead-chasing plus contradictions scan—and confirms that broad, multi-part questions are acceptable.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description names a specific verb and resource: 'grounded multi-source research across Pipeworx's 1517 STRUCTURED data sources' and explicitly contrasts itself with 'open-web search.' It also gives concrete example questions and routes single lookups to ask_pipeworx, so an agent can clearly distinguish this from sibling tools.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines5/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

The description provides explicit when-to-use guidance: 'Best for broad/multi-part questions over structured data,' and an explicit exclusion: 'For a single lookup use ask_pipeworx.' It also states the account/paid-tier prerequisite and names a fallback for unsigned-in users.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

B3.4/5.0
Disambiguation2/5

The set mixes several overlapping query surfaces: ask_pipeworx and ask_pipeworx_beta are currently identical, ask_pipeworx_grounded/deep_research/discover_tools/suggest_questions all serve related retrieval/discovery purposes, and the five polymarket_* tools have similar opportunity-finding goals. Only the unusually detailed descriptions save some tools from misselection; an agent would struggle to quickly pick the right one.

Naming Consistency4/5

Names are uniformly snake_case and mostly follow a verb_noun or prefixed_noun pattern (ask_pipeworx, validate_claim, polymarket_edges, scan_dependency). Minor inconsistencies exist — bare nouns like gene/variant/search sit alongside compound names like generate_llms_txt, and the pipeworx_ prefix isn't applied to ask_pipeworx/deep_research — but the overall style is recognizable and predictable.

Tool Count2/5

36 tools is too many for a coherent server, especially since the domains are largely unrelated: 5 gnomAD genomics tools, 20+ Pipeworx/Polymarket data tools, memory CRUD, subscription management, and a couple of web-dev utilities. The count doesn't align with a single obvious scope and would overwhelm an agent selecting among them.

Completeness3/5

Within the major subdomains coverage is strong: memory has remember/recall/forget, subscriptions have full lifecycle tools, and Polymarket has edge detection plus fill-risk checking. However, there are notable gaps — no tool to fetch a pipeworx:// citation URI despite deep_research promising resolvable citations, and the gnomAD surface lacks batch queries, coverage, or constraint data for a server named Gnomad.

Resources