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    Provides MCP tool adapters for Bioconductor methods like limma, DESeq2, and fgsea, enabling statistical analysis of omics data through containerized R execution. It serves as a bridge between MCP clients and bioinformatics tools for reproducible research workflows.
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    Apache 2.0
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    An advanced MCP server powered by PHREEQC for industrial wastewater treatment modeling, offering 17 tools for chemical equilibrium, kinetic reactions, and optimization like lime softening and phosphorus removal.
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    3
    MIT
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    Provides access to real-time water data from the USGS Water Services API, allowing users to fetch instantaneous measurements like stream flow, gage height, temperature, and water quality parameters from thousands of monitoring stations across the US.
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    Fits a lithium-ion full-cell dual-water-tank model from charge/discharge voltage-capacity data for battery aging mechanism identification, with parameter fitting, batch processing, and MCP server integration.
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    Apache 2.0
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    Enables document conversion between PDF, DOCX, and Markdown formats to facilitate reading and editing complex files in AI tools like Claude Desktop or Cursor. It utilizes marker-pdf and pandoc to provide structured text versions of documents, helping to manage context and support unsupported file types.
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    Enables natural language search and discovery of open-access scientific datasets through the EOSC Data Commons OpenSearch service. Provides tools to search datasets and retrieve file metadata using LLM-assisted queries.
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    14
    MIT
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    Local MCP server that registers restricted Python filters and runs them against local JSON, YAML, and TXT files, enabling safe data filtering and file conversion.
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    MIT
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    Searches and fetches research datasets across Zenodo, DataCite (Dryad/Figshare/Dataverse/OSF), NCBI omics archives (GEO/SRA/BioProject), and the literature (PubMed/OpenAIRE) through one normalized model — deduplicating by DOI, expanding organism queries with NCBI Taxonomy synonyms, and bridging papers to the datasets they produced. Resolves citations and open-access full text, and downloads files.
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    6
    2
    MIT
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    A single MCP server that transparently routes user requests to 83 open-data sources with built-in discovery and autonomous plugin creation.
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    MIT
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    Enables LLMs to profile and analyze tabular data files (CSV, Parquet, Excel, JSON) by extracting schema, statistics, data quality issues, and dtype suggestions, returning structured JSON.
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    6
    MIT
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    Provides real-time market data tools (quotes, news, earnings calendar, watchlist scanner, and composite analysis) for AI agents via Finnhub, with optional Alpaca broker integration and graceful degradation.
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    6
    MIT
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    An MCP server for discovering, downloading, querying, and analyzing datasets from Ontario's open data portals, allowing natural language questions and high-performance analytics via DuckDB.
    Last updated
    23
    1
    MIT