"A server for running bioinformatics tools" matching MCP servers:

Provides AI agents with real-time ground truth about what's actually running on the machine, including live agent sessions, listening TCP ports, loaded daemons, and system stats. It reads directly from the OS via fixed commands, ensuring agents never rely on stale docs or transcripts.

Enables conversational analysis of n8n workflows and Make scenarios for silent-failure risks, with tools to explain findings, compare workflow versions, and list rules.

Enables AI agents to perform local video, audio, and file operations inside an isolated workspace, including cutting/concat videos, extracting audio, transcribing, and managing files, with typed responses and background job support.

Enables agents to compress JPEG, PNG, and WebP images to a target byte size, split PDFs by page or ranges, and remove image metadata while processing local files without sending file bytes over the network.

MCP server enabling Claude Code to capture screenshots of Windows applications through WSL2, allowing AI to diagnose UI errors and verify layouts.

Enables AI agents to control a Playwright-driven browser through natural-language instructions, including page interaction and live browser task execution.

A local MCP server that enables AI applications like Claude Desktop to securely access and work with Obsidian vaults, providing capabilities for reading notes, executing templates, and performing semantic searches.

Local MCP server for A-share stock trading via Tonghuashun, offering account/position queries, buy/sell/cancel orders with risk controls and forced user confirmation; currently simulated with a reserved interface for real broker channels.

MCP server for personal knowledge management providing AI-powered tools for semantic search, audio transcription, image generation, and PPT creation.

An MCP server for searching and downloading books from Library Genesis, supporting EPUB, MOBI, PDF, and more through natural language queries.

Provides five safe tools (calc, search, model_drift, compare_runs, grade_answer) for arithmetic, keyword search, model drift monitoring, eval comparison, and answer grading against sources, all implemented directly from the MCP spec with zero dependencies.

Enables AI assistants to keep Rojo serving and auto-connected for Roblox Studio projects and to import FBX, OBJ, GLB, or GLTF models through Studio's own 3D Importer on Windows.

An MCP server that provides a persistent sandbox for AI coding agents to explore codebases server-side, returning only compact summaries to reduce context consumption.

Enables extraction of recipes from PDFs or JPG files and conversion into structured HTML, with interactive region selection and OCR via a web GUI.

Enables AI assistants to search YouTube, fetch transcripts, and get AI summaries of videos without API keys.

Provides a local MCP server for AI-powered web crawling on Windows, enabling agents to directly crawl and extract web content without requiring WSL.

Enables coding agents to add a bounded semantic-judgment layer for routing, ranking, extraction, verification, and escalation, returning typed signals and review recommendations.

Exposes AWS Palace finite-element electromagnetic simulation as a set of JSON-in/JSON-out tools, so an agent can build geometry and meshes, generate and lint configs, estimate cost, guard and launch runs, and read back S-parameters, eigenmodes, Q and energy results. Results return as JSON text plus structured content over a dependency-free stdio JSON-RPC connection.

Enables an AI assistant to control a Hyprland/Wayland Linux desktop through 178 tools across 30 categories, covering audio, window and workspace management, themes and wallpapers, screenshots and recording, Bluetooth, media playback, notifications, system stats, and chained multi-step macros. Everything runs locally via hyprctl, PipeWire, and standard Linux utilities, with no cloud dependencies.

MCP server for compressing AI embeddings by 5-7x using TurboQuant (PolarQuant + QJL), with tools to compress, decompress, estimate savings, and embed+compress vectors.

A validation layer for AI coding assistants that enforces explicit LLM evaluations on plans, code diffs, and tests to ensure safer and higher-quality code.

An MCP server that lets Claude control a Minecraft bot with 40+ actions including movement, combat, crafting, and inventory management. Built on Mineflayer, it supports Microsoft authentication, pathfinding, and auto-reconnect.

Enables ChatGPT to invoke native OpenClaw browser operations directly through an MCP connection, forwarding actions to the local Gateway while preserving runtime errors and providing a local call monitor.

Enables browser automation (navigate, screenshot, click, type, etc.) for Claude Code via MCP protocol, with a Chrome extension for configuration.

A local Model Context Protocol (MCP) server that exposes custom tools to Claude Desktop, enabling direct interaction with your local environment. It provides a framework for building and integrating custom TypeScript tools into the Claude interface.

A-MEM is a self-evolving memory system for coding agents that automatically organizes knowledge into a Zettelkasten-style graph with dynamic relationships, enabling semantic and structural search.

Local MCP servers that give Claude Code access to other tools mid-session.

The local PDF workflow for Claude Desktop and MCP hosts: fill, sign, merge, split, extract, and analyze PDFs without sending files to a web app.

Enables LLM agents to query de-identified FHIR-shaped hospital data through audited, read-only tools for patients, encounters, conditions, observations, medications, and interaction checks, while any medication write stays a draft that a clinician must confirm out-of-band.

Enables Claude to perform exact math, date and holiday calculations, CSV/SQLite/PDF and text processing, filesystem and system diagnostics, network requests, and ffmpeg-based media operations through small purpose-built tools.