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"A database for genomic and biological data (Ensembl)" matching MCP servers:

  • Baidu Vector Database MCP Server by baidu

    Baidu Vector Database MCPofficial

    baidu
    A
    license
    B
    quality
    D
    maintenance
    A server that provides access to Baidu Cloud Vector Database functionality through the Model Context Protocol, enabling LLM applications to perform vector searches and database operations via natural language.
    14
    3
    Apache 2.0

  • MCP Server for Qdrant

    Jimmy974
    A
    license
    Not graded
    quality
    D
    maintenance
    A Machine Control Protocol (MCP) server that enables storing and retrieving information from a Qdrant vector database with semantic search capabilities.
    Apache 2.0

  • mcp-lancedb

    adiom-data
    A
    license
    Not graded
    quality
    D
    maintenance
    A Model Context Protocol (MCP) server that enables LLMs to interact directly the documents that they have on-disk through agentic RAG and hybrid search in LanceDB. Ask LLMs questions about the dataset as a whole or about specific documents.
    18
    78
    MIT

  • MCP Data Server

    hkonda015
    A
    license
    Not graded
    quality
    D
    maintenance
    Indexes local files (PDF, TXT, CSV, Markdown) with embeddings for semantic search. Provides both CLI and MCP server interfaces so Claude Desktop can search and read your local documents.
    MIT

  • MCP Server for Milvus

    zilliztech
    A
    license
    Not graded
    quality
    C
    maintenance
    An integration server implementing the Model Context Protocol that enables LLM applications to interact with Milvus vector database functionality, allowing vector search, collection management, and data operations through natural language.
    240
    Apache 2.0

  • Munin AI Memory

    3d-era
    F
    license
    Not graded
    quality
    B
    maintenance
    Munin is a high-performance, pragmatic memory layer for AI agents (Cursor, Claude Code, OpenClaw, Gemini CLI,...). Unlike other solutions, Munin focuses on developer productivity with: * Multi-Project Support: Isolate memories into separate "brains" (Context Cores). * GraphRAG: Automatically builds a knowledge graph from your context. * Sub-200ms Search: Blazing fast Hybrid & Semantic
    3

  • RAG Database MCP Server

    Human-center
    F
    license
    Not graded
    quality
    D
    maintenance
    Enables AI assistants to search and query PDF documents through a local RAG system with vector embeddings. Provides semantic document search capabilities while keeping all data stored locally without external dependencies.

  • EyeLevel RAG MCP Server

    wannabidr
    F
    license
    Not graded
    quality
    Not graded
    maintenance
    A local Retrieval-Augmented Generation system that enables users to ingest markdown files into a FAISS-powered vector knowledge base for semantic search. It provides tools for document indexing and context retrieval to support informed LLM queries without external dependencies.

  • Graph RAG MCP Server for

    saselvan
    A
    license
    Not graded
    quality
    D
    maintenance
    A local-first Graph-RAG system combining ChromaDB with metadata-based graph relationships and Gemini 2.5 Flash for intelligent Q&A over Obsidian vaults, supporting MCP clients like Claude Desktop, Cursor, and Raycast.
    MIT

  • privateGPT MCP Server

    Fujitsu-AI
    A
    license
    Not graded
    quality
    D
    maintenance
    A server implementation that allows secure communication between MCP clients and privateGPT, enabling users to chat with privateGPT using knowledge bases and manage sources, groups, and users through a standardized Model Context Protocol.
    6
    MIT

  • askDB

    RaviSenjaliya
    F
    license
    A
    quality
    B
    maintenance
    askDB is an MCP server that retrieves relevant database schema (DDL) from a Pinecone index and provides it to LLMs to write SQL, without connecting to the database itself.
    3
  • Chroma MCP Server by chroma-core

    Chroma MCP Serverofficial

    chroma-core
    A
    license
    A
    quality
    D
    maintenance
    A server that provides data retrieval capabilities powered by Chroma embedding database, enabling AI models to create collections over generated data and user inputs, and retrieve that data using vector search, full text search, and metadata filtering.
    13
    585
    Apache 2.0

  • @rosalinddb/mcp

    rosalinddb
    A
    license
    A
    quality
    A
    maintenance
    Model Context Protocol server for RosalindDB, enabling AI clients to create datasets, ingest vectors, run similarity queries, and check usage on a cost-optimized vector search database.
    11
    16
    Apache 2.0

  • Chroma MCP Server

    privetin
    A
    license
    A
    quality
    C
    maintenance
    A Model Context Protocol server providing vector database capabilities through Chroma, enabling semantic document search, metadata filtering, and document management with persistent storage.
    6
    41
    MIT

  • MCPg - Production-grade

    devopam
    A
    license
    B
    quality
    A
    maintenance
    A production-grade Model Context Protocol server for PostgreSQL. Lets AI agents safely inspect, query, operate, and tune a Postgres database — over 100 tools spanning catalog introspection, query intelligence, natural-language SQL, structural diffs, hybrid search, graph queries, data movement, live ops, and more.
    12
    186
    9
    MIT

  • AGI MCP Server

    randyandrade
    F
    license
    B
    quality
    D
    maintenance
    Enables persistent memory for AI systems by providing tools for episodic, semantic, and procedural data storage through a vector-and-graph-enhanced database. It allows models to maintain long-term continuity using similarity search, thematic clustering, and identity tracking.
    24
    1
  • Memgraph MCP Server by memgraph

    Memgraph MCP Serverofficial

    memgraph
    -
    license
    C
    quality
    Not graded
    maintenance
    A lightweight server implementation of the Model Context Protocol that connects Memgraph database with LLMs, allowing users to interact with graph databases through natural language.
    1
    25