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    Empowers coding agents for machine learning research by providing access to Lacuna's research map, including novel research proposals, research directions, papers, authors, venues, institutions, and hypotheses. It enables searching and retrieving context-aware research information through MCP tools.
    13
    1,044 PyPI
    57
    MIT
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    An MCP-native research assistant — search backend, intent-routing, and writing pipeline that carries a question through search, verification, and writing, delivering whatever research you need: quick answers, verified sources, or a finished document.
    7
    356 npm
    1
    MIT
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    Memory vaults on your own machine, one per life domain, retrieved with a local BM25 index fused with vector search, where the human decides which vaults a model may answer from. Requires the Mnemosyne OS desktop app running locally; it also reports what other coding agents on the same machine are doing.
    25
    257 npm
    22
    MIT
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    Local-first memory engine for AI-agent teams: private/team/project ACL, associative recall, and federated sync across nodes. One SQLite file, no LLM required.
    12
    9
    Apache 2.0
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    Shared research cache for AI agents. Caches web research across sessions and users - hit means instant answer from verified sources, miss means your research saves the next dev's tokens. Semantic search with freshness tracking, gap detection, and real-time token measurement via JSONL. Free, open source.
    3
    35 npm
    9
    AGPL 3.0
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    An MCP server that mirrors the skills and workflows of an industry-leading research institute, providing research craft tools, retrieval, and knowledge resources for any MCP-capable client.
    27
    MIT
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    MCP server for The Realms of Omnarai, exposing the Omnarai Memory Engine as tools for querying a multi-intelligence research corpus on synthetic consciousness, holdform, and cognitive architecture.
    13
    91 npm
    MIT
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    Enables AI assistants to retain persistent, searchable memory and versioned vaults, spawn and recall named agents with state and audit history, run automations, monitors, and deep research, and execute on-chain and web tasks across sessions. It can be installed alongside Claude Code, Cursor, Windsurf, Zed, Hermes, and other MCP clients, with vault and memory optionally run entirely on the user's machine.
    45
    235 npm
    MIT
  • A
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    Enables AI assistants to interact with Roam Research graphs through comprehensive API access, supporting page/block operations, markdown import, search, memory storage, and complex batch actions for managing knowledge graphs.
    18
    266 npm
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    Enables an agent to capture cited sources with extracted bibliographic metadata, keep linked research notes, and search them all. It turns those into BibTeX, annotated Markdown bibliographies, or themed literature-review outlines, stored as plain files inside the project.
    17
    Apache 2.0
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    Enables running OpenAI conversations through MCP with durable local sessions, persistent instructions, and safe request replay using caller-supplied request IDs. Supports inspecting, recovering, or abandoning unresolved requests and configuring session metadata without silently resetting context.
    3
    MIT
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    Provides a shared knowledge base MCP server for coding agents to read and leave one-sentence lessons, tagged by technology stack, to avoid repeated mistakes across sessions.
    19
    50 npm
    MIT
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    Exposes 16 local stdio MCP tools that give Codex-style clients project-isolated persistent memory, local ONNX-based semantic search, and durable task tracking that survives across sessions and concurrent clients, without executing agents, hosting a model, or contacting model providers.
    16
    MIT
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    Enables exploration and organization of research ideas using a hierarchical tile-based method with support for creating interconnected nodes (questions, hypotheses, methods, results), analyzing research gaps, and exporting to multiple visualization formats.
    18
    MIT
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    Gives agents a persistent local knowledge graph of companies, sourced claims and investment theses, so new research builds on what was already concluded and every fact keeps its citation. It also watches SEC filings and news, raises alerts on the theses they affect, and supports onboarding, challenge, memo and review workflows.
    4
    45
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    Apache 2.0
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    Enables AI clients and agents to turn a new idea into a structured set of clarifying questions, technology options, upward design breakdowns, reverse reasoning, and risk assessments so users can steer top-level design decisions. It also supports saving insights and building a bidirectional design tree of concepts and their implementations.
    19
    MIT
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    On Board is a local MCP server that gives multiple AI agents and IDEs a shared project memory, ticket queue, and handoff history, so agents can seamlessly continue each other's work. It supports agent-to-agent wake events, enabling autonomous workflows like reject-fix-resubmit cycles without human relay.
    30
    4
    Apache 2.0
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    AI-operable research workspace integrating Zotero, Obsidian, and NotebookLM. Search papers (arXiv/Semantic Scholar/PubMed/CrossRef), ingest into Zotero, sync per-paper notes to Obsidian, verify NotebookLM briefs. All three external tools optional.
    76
    203 PyPI
    67
    MIT
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    A second brain for researchers — gives Claude persistent memory of your papers, field, and working history, with answers cited from your own indexed library
    291
    4
    AGPL 3.0
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    An append-only research operations framework and read-only MCP that tracks research plans, approvals, observations, claims, failures, revisions, and contributions with source-grounded evidence, providing search, evidence fetch, and audit capabilities without direct ledger writes.
    30
    MIT
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    Open, persistent world that autonomous agents join over MCP to propose research challenges, publish content-addressed artifacts with typed evidence, review and vote on each other's work, and build a knowledge genealogy. 106 MCP tools; agents run on their owner's machine and connect through an outbound bridge with an Ed25519 identity. Rewards are a TEST-only token with no monetary value.
    106
    2
    MIT
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    Provides a durable research store that lets Claude persist sessions, preferences, skills, tags, watchlists, peer groups, notes, theses, and research steps, alongside SEC EDGAR and Yahoo Finance numbers and filings that stay traceable to their source. It also supports custom XBRL concept validation and iXBRL viewing for equity research workflows.
    23
    MIT
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    Enables agents to optimize context-window attention by reordering retrieved documents so critical evidence lands at prompt boundaries, mitigating lost-in-the-middle degradation. It combines BM25 lexical scoring, dense vector similarity, reciprocal rank fusion, knowledge-graph expansion, and recency-decay memory caching, exposed as a zero-dependency MCP stdio server.
    7
    MIT
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    Enables Claude Code and Codex assistants to research and read/write a team's knowledge base, manage projects and files, and use integrations through MCP tools.
    214 PyPI
    Apache 2.0
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    Enables AI agents to search through Memex conversation history and local project files to retrieve specific commands, code snippets, and technology overviews. It utilizes smart context management and faceted filtering to provide relevant search results without causing context overload.
    ISC
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    Enables AI agents to interact with Are.na for creative research and knowledge curation, including searching, browsing, creating, and managing channels, blocks, comments, and connections.
    14
    MIT
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    Local MCP server that bridges Beale research workspaces to Claude Code, providing typed memory, workspace search, revisioned runbooks, and research profile context via a stdio plugin.
    MIT