"A database for genomic and biological data (Ensembl)" matching MCP servers:

50 tools and 400 functions for working with Excel/.xlsx spreadsheets — read/write, recalculate formulas, diff, repair broken references, and audit. Built for AI agents.

An MCP server that exposes macOS Spotlight search as tools, wrapping mdfind and mdls to provide full-text and metadata file search across the system.

A native Nextcloud app that exposes the instance as an MCP server so Claude and other MCP clients can read, search, and (with admin-granted permissions) edit files, notes, calendars, Deck cards, and Talk conversations. It runs inside Nextcloud with OAuth or app-password sign-in, applying each user's own Nextcloud permissions and admin-controlled per-operation grants.

Enables AI models to securely analyze SQLite datasets and read local text documents through a local stdio interface. It provides read-only querying, schema discovery, pagination, and timeout protections to prevent data leaks or destructive changes.

A collection of small MCP servers for macOS automation that expose Apple Mail, MoneyMoney, and Spotlight functionality as tools via AppleScript and command-line, enabling AI applications to search mail, manage contacts and transactions, and perform system-wide file searches through natural language.

MCP server for querying work checkpoints and storing finalized timesheet reports in SQLite.

Local MCP server that registers restricted Python filters and runs them against local JSON, YAML, and TXT files, enabling safe data filtering and file conversion.

Enables AI agents to perform local video, audio, and file operations inside an isolated workspace, including cutting/concat videos, extracting audio, transcribing, and managing files, with typed responses and background job support.

MCP server that profiles local data files (CSV, Parquet, JSON, Excel) and returns compact structured summaries with data-quality flags, enabling AI agents to understand datasets without seeing raw rows.

MCP server that encapsulates Apple Mail on macOS via AppleScript, enabling invoice PDF search, attachment saving, and message flagging through natural language.

MCP server for privacy-gated local Apple data access including Mail, Messages, Notes, Calendar, Contacts, Photos, Reminders, Voice Memos, and iCloud Drive.

Profiles authorized local datasets into inspectable Data Context for AI assistants, with optional local model-assisted interpretation.

Self-hosted MCP coding server and unified local Control Center for ChatGPT web, enabling file editing, command execution, Git operations, and optional upstream MCP tools with conversation access controls.

Enables SQL Server database operations (queries, table management) and file system access (read, write, directory listing) with security controls. Supports comprehensive database interactions and file management through a unified MCP interface.

Enables users to safely read, write, edit, create directories, and list trees within a structured local Windows environment, with strict path validation and Git-based undo/version control.

MCP server for Obsidian vaults, optimised for Cursor agents — safe note editing, lean tool surface, direct filesystem access.

A FastAPI-based MCP server scaffold designed to extract material tables from AutoCAD DWG files. It enables users to automate CAD data processing by configuring drawing folder paths and layer-specific extraction parameters.

Enables document conversion between PDF, DOCX, and Markdown formats to facilitate reading and editing complex files in AI tools like Claude Desktop or Cursor. It utilizes marker-pdf and pandoc to provide structured text versions of documents, helping to manage context and support unsupported file types.

TheWeave is a markdown-native memory architecture for Claude and any MCP-aware agent. Your agent's memory lives as plain .md files you own: a 5-verb MCP core over the vault, query-driven PageRank retrieval, bi-temporal facts (valid_from / valid_until), and a persona-as-vault model. No database and no embeddings server. The files are the memory, inspectable in your editor and versionable in git.

A simple Model Context Protocol (MCP) server that allows LLMs to create and manage user entries in a JSON file system database.