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  • plr-mcp

    di-omics
    A
    license
    A
    quality
    B
    maintenance
    A Model Context Protocol server for PyLabRobot that exposes liquid handler, plate reader, thermocycler, and heater-shaker as MCP tools. It ships in simulation mode by default, allowing end-to-end testing without hardware.
    Last updated
    10
    MIT

  • CONTAM MCP

    summer521521
    A
    license
    A
    quality
    C
    maintenance
    A Windows-based MCP server that exposes NIST's CONTAM simulation tools and ContamX bridge-mode controls to AI agents. It enables automated airflow and contaminant transport modeling, including project inspection, simulation execution, and real-time bridge session management.
    Last updated
    15
    1
    MIT

  • AlphaGenome MCP Server

    taehojo
    A
    license
    B
    quality
    D
    maintenance
    Enables AI-powered genomic variant analysis including variant impact prediction, regulatory element discovery, and batch variant scoring. Currently operates in mock mode as a proof-of-concept awaiting the public release of Google DeepMind's AlphaGenome API.
    Last updated
    20
    14
    2
    MIT

  • SWMM-MCP

    kLabUM
    A
    license
    B
    quality
    D
    maintenance
    An MCP server that provides a toolbox for interacting with EPA SWMM stormwater models, enabling users to analyze model data and interpret results through LLM-driven tools. It assists stormwater modelers in understanding hydraulic systems and modeling behavior using natural language interfaces.
    Last updated
    18
    6
    MIT

  • SCMCP

    scmcphub
    A
    license
    -
    quality
    C
    maintenance
    An MCP server that enables scRNA-Seq analysis through natural language, providing tools for data preprocessing, clustering, and biological visualization. It supports both predefined function execution and a flexible code mode powered by a Jupyter backend for automated single-cell transcriptomics workflows.
    Last updated
    15
    BSD 3-Clause