"Scraping a marketplace to generate a JSON file with name, description, and link" matching MCP servers:

Grounds gene-nomenclature work in the HUGO Gene Nomenclature Committee (HGNC) dataset, enabling resolution of gene symbols and IDs to canonical HGNC identifiers, plus cross-references and batch operations.

An MCP server that provides mouse genetics data from Mouse Genome Informatics (MGI), enabling LLM agents to query markers, mutations, alleles, phenotypes, and disease models.

MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.

Enables querying ClinGen curated evidence for gene-disease validity, dosage, actionability, and variant pathogenicity via MCP tools.

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

MCP server that provides tools to query harmonized gene-disease validity data from the Gene Curation Coalition, supporting consensus and conflict detection for gene-disease assertions.

An MCP server that enables querying rare-disease data from Orphanet, including disease nomenclature, cross-references, classifications, gene associations, HPO phenotypes, epidemiology, and natural history.

Enables querying of per-residue missense tolerance, Pfam domain annotations, and variant counts for human transcripts by wrapping the MetaDome web service. Provides MCP tools for resolving transcripts, requesting tolerance landscapes, and identifying constrained regions.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

Enables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).

An open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.

Enables AI agents to query free biomedical and pharmaceutical APIs for clinical trials, drug data, molecular structures, adverse events, and research literature.

Provides oncology data (research, news, FDA approvals, clinical trials) and IBM MAMMAL biomedical predictions (PPI, DTI, ClinTox) as MCP tools. Allows AI agents to query cancer datasets and run predictions through a remote MCP server.

MyChart MCP Server

Enables AI agents to rank US healthcare organizations for clinical trial site feasibility, predicting patient accrual for a Graves' disease protocol using claims and registry data.

Condition-aware ingredient & product safety intelligence for AI agents. Every answer carries a claim-level evidence attestation, verdict, an evidence tier, and a citation – curated against authoritative sources (LactMed, InfantRisk, PubMed, DSLD, DermNet, EU CosIng) by Health AI. Hosted MCP server – no install, no key. Endpoint: https://mcp.healthai.com (Streamable HTTP, JSON-RPC 2

Enables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.

Enables biopharma catalyst research by aggregating signals from ClinicalTrials.gov, PubMed, SEC EDGAR, openFDA, and Yahoo Finance, with a single tool to audit a ticker/drug combination and return a forensic verdict.

Upload your raw DNA file from 23andMe, AncestryDNA, MyHeritage, FamilyTreeDNA, or any VCF -- and watch a team of AI agents fan out across 16+ public genomics databases, share discoveries with each other in real time, and produce a comprehensive health report. Everything runs on your machine. Nothing is uploaded anywhere.