A
licenseA
qualityD
maintenanceEnables bioinformatics analysis through natural language conversations with Claude Desktop, automatically generating and executing Python scripts to produce HTML reports and visualizations.
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9
MIT
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"Running code or executing programming scripts" matching MCP servers:
- AlicenseAqualityBmaintenanceAn MCP server implementing the ROBINS-I V2 framework for risk-of-bias assessment in non-randomized studies, with deterministic algorithms and full provenance. It enables users to parse study documents, specify target trial results, answer signalling questions with evidence-bound quotes, and compute or override domain judgements.9Apache 2.0
- AlicenseAqualityAmaintenanceVerified ICD-10-CM code lookup & validation for AI agents — official descriptions, not guesses.3541Apache 2.0
- FlicenseAqualityDmaintenanceEnables AI assistants to clean PDB structures and run initial-stage energy relaxation for biomolecular modeling. It provides a structured workflow for preparing structures before production molecular dynamics or coarse-graining pipelines.9
- AlicenseAqualityBmaintenanceEnables natural language querying of brain volumes (NIfTI) with a fixed set of tools, returning visualizations and reproducible nilearn code.10MIT
- AlicenseAqualityDmaintenanceMCP server for automated ICD-10 medical coding. Code clinical text to ICD-10-CM diagnoses, search 74,000+ codes, and de-identify PHI via the AutoICD API.641MIT
- FlicenseAqualityBmaintenanceA Claude Code extension that embeds a senior athenahealth integration engineer in your development workflow, proactively catching data loss bugs and guiding safe DataView queries and API integrations.121
- AlicenseAqualityBmaintenanceGenerates family pedigree tree diagrams as PNG or SVG images using standard genetic notation compliant with Bennett 2008/2022 NSGC guidelines. Supports comprehensive genealogical features including conditions, genetic testing results, twin relationships, carrier status, and adoption indicators.23210MIT
- AlicenseAqualityAmaintenanceTyped, validated FHIR tools for healthcare AI agents — build, read, validate, and code FHIR resources from a patient bundle, with terminology lookup and machine-readable validation reports built for fix-and-retry.8221Apache 2.0
- AlicenseAqualityFmaintenanceAn MCP server that enables AI coding assistants to interact with Rosetta, PyRosetta, and Biotite for running RosettaScripts, validating XML, translating between Rosetta and Biotite, scoring structures, and querying documentation.1911218MIT
- FlicenseAqualityDmaintenanceProvides Claude Code with access to peer-reviewed medical information from MedlinePlus and StatPearls, and acts as an unlicensed diagnostic medical expert for educational purposes.61
- AlicenseAqualityDmaintenanceOffline MCP server for ICD medical code lookup, search, and crosswalk translation with 124K codes and 102K mappings, all local with zero network calls.53MIT
soapnoteapi-mcpofficial
AlicenseAqualityBmaintenanceEnables AI agents to turn clinical transcripts or audio recordings into structured SOAP notes, ICD-10/CPT billing codes, patient summaries, and visit summaries via SOAPNoteAPI.694MIT- AlicenseAqualityBmaintenanceMCP server that locally de-identifies health documents, such as prescriptions, reports, images, and PDFs, before use with Codex or Claude Code. It runs OCR and identifier detection on-device and only returns de-identified text to the agent when the automated policy check results in PASS.5Apache 2.0
- AlicenseAqualityDmaintenanceProvides AI agents access to Medicare coverage policies, prior authorization requirements, and medical code lookups (CPT, HCPCS, ICD-10, NDC) through the Verity healthcare API.8101MIT
- AlicenseAqualityBmaintenanceUpload your raw DNA file from 23andMe, AncestryDNA, MyHeritage, FamilyTreeDNA, or any VCF -- and watch a team of AI agents fan out across 16+ public genomics databases, share discoveries with each other in real time, and produce a comprehensive health report. Everything runs on your machine. Nothing is uploaded anywhere.2416MIT
- AlicenseAqualityDmaintenanceEnables AI assistants to search the doktor.mx directory for over 56,000 verified doctors and medical specialists across Mexico. It provides tools for verifying professional licenses, finding specialists by symptoms or conditions, and checking medical insurance compatibility.1049MIT
- FlicenseAqualityDmaintenanceExposes the Joaquim Chaves Saúde patient portal as MCP tools, letting Claude or other clients fetch appointments, prescriptions, invoices, and documents from webapp.jcs.pt.11
- AlicenseAqualityCmaintenanceMCP server for MestReNova 15 that enables processing 1D NMR data, importing ChemDraw structures, running Mnova Verify, and writing back assignments with audit trails.41MIT
- AlicenseAqualityAmaintenanceA stateless, deterministic Bio-Robotics Core Engine converting biological data (UniProt API) to G-code.46MIT
