"How to upload a file to a server and get a download link" matching MCP servers:

Enables natural-language querying of a mock legacy healthcare database and returns validated FHIR resources (Patient, Observation, Condition).

Grounds gene-nomenclature work in the HUGO Gene Nomenclature Committee (HGNC) dataset, enabling resolution of gene symbols and IDs to canonical HGNC identifiers, plus cross-references and batch operations.

MCP server that provides tools to query harmonized gene-disease validity data from the Gene Curation Coalition, supporting consensus and conflict detection for gene-disease assertions.

An MCP server that provides mouse genetics data from Mouse Genome Informatics (MGI), enabling LLM agents to query markers, mutations, alleles, phenotypes, and disease models.

MCP server that provides tools for querying the Human Phenotype Ontology (HPO) including term lookup, hierarchy exploration, cross-ontology mappings, and gene-phenotype-disease associations, all grounded in a local SQLite database for fast offline lookups.

Enables querying ClinGen curated evidence for gene-disease validity, dosage, actionability, and variant pathogenicity via MCP tools.

An MCP server that grounds protein research in the UniProt SPARQL endpoint, providing tools for querying proteins, sequences, variants, diseases, and more via intent-named tools and raw SPARQL.

An MCP server that enables querying rare-disease data from Orphanet, including disease nomenclature, cross-references, classifications, gene associations, HPO phenotypes, epidemiology, and natural history.

Enables querying of per-residue missense tolerance, Pfam domain annotations, and variant counts for human transcripts by wrapping the MetaDome web service. Provides MCP tools for resolving transcripts, requesting tolerance landscapes, and identifying constrained regions.

Integrates with Get Notes API to search and retrieve knowledge from configured knowledge bases with AI-powered synthesis and raw recall capabilities.

Enables AI agents to rank US healthcare organizations for clinical trial site feasibility, predicting patient accrual for a Graves' disease protocol using claims and registry data.

Enables genomic sequence analysis through the Evo 2 model, supporting DNA sequence scoring, embedding, generation, and variant effect prediction with multiple model checkpoints (7B, 40B, 1B parameters).

Enables variant annotation and effect prediction using the Ensembl VEP API, with support for batch and single queries.

An open source biomedical research agent that provides LLMs with 28 tools for drug discovery, protein analysis, literature search, medical imaging, omics, and sandbox execution, all running locally via Ollama and MedGemma.

MyChart MCP Server

A PubMed MCP server that enables LLMs to search, retrieve details, and download full-text articles from PubMed, with support for batch queries, cross-referencing, and EndNote export.

An MCP server for longevity and metabolic medicine that provides a medication catalog, dosing protocols, contraindication screening, drug interaction checks, lab recommendations, and patient intake pathways across 35 compounds.

Enables agents to interact with a clinic booking API, including listing specialties, doctors, and a patient's appointments, and booking or cancelling appointments when the active profile permits, while preserving the caller's authority and screening tool descriptions for safety.

Exposes a clinic's knowledge base and structured records to Claude Desktop as callable tools, with read tools grounded with citations and write tools gated behind approval.

Enables querying a synthetic patient dataset with tools to look up patients by ID, age, disease, name, and get statistics, connecting Claude Desktop to local data.